Commit graph

26542 commits

Author SHA1 Message Date
yi.wu 4d356554a6 [MINOR][SQL] Fix error position of NOSCAN
### What changes were proposed in this pull request?

Point to correct position when miswrite `NOSCAN` detects.

### Why are the changes needed?

Before:

```
[info]   org.apache.spark.sql.catalyst.parser.ParseException: Expected `NOSCAN` instead of `SCAN`(line 1, pos 0)
[info]
[info] == SQL ==
[info] ANALYZE TABLE analyze_partition_with_null PARTITION (name) COMPUTE STATISTICS SCAN
[info] ^^^
```

After:

```
[info]   org.apache.spark.sql.catalyst.parser.ParseException: Expected `NOSCAN` instead of `SCAN`(line 1, pos 78)
[info]
[info] == SQL ==
[info] ANALYZE TABLE analyze_partition_with_null PARTITION (name) COMPUTE STATISTICS SCAN
[info] ------------------------------------------------------------------------------^^^
```

### Does this PR introduce any user-facing change?

Yes, user will see better error message.

### How was this patch tested?

Manually test.

Closes #27662 from Ngone51/fix_noscan_reference.

Authored-by: yi.wu <yi.wu@databricks.com>
Signed-off-by: Takeshi Yamamuro <yamamuro@apache.org>
2020-02-21 15:21:53 +09:00
Nicholas Chammas 4d5166f840 [SPARK-30880][DOCS] Delete Sphinx Makefile cruft
Split off from #27534.

### What changes were proposed in this pull request?

This PR deletes some unused cruft from the Sphinx Makefiles.

### Why are the changes needed?

To remove dead code and the associated maintenance burden.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Tested locally by building the Python docs and reviewing them in my browser.

Closes #27625 from nchammas/SPARK-30731-makefile-cleanup.

Lead-authored-by: Nicholas Chammas <nicholas.chammas@liveramp.com>
Co-authored-by: Nicholas Chammas <nicholas.chammas@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-21 14:53:40 +09:00
wuyi 5eb004f4bb Revert "[SPARK-28093][SQL] Fix TRIM/LTRIM/RTRIM function parameter order issue"
### What changes were proposed in this pull request?

This reverts commit bef5d9d6c3.

### Why are the changes needed?

Revert it according to https://github.com/apache/spark/pull/24902#issuecomment-584511167.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Pass Jenkins.

Closes #27540 from Ngone51/revert_spark_28093.

Lead-authored-by: wuyi <yi.wu@databricks.com>
Co-authored-by: yi.wu <yi.wu@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-21 12:55:32 +08:00
Gengliang Wang 2a695e6d15 [SPARK-30907][DOCS] Revise the doc of spark.ui.retainedTasks
### What changes were proposed in this pull request?

Revise the documentation of `spark.ui.retainedTasks` to make it clear that the configuration is for one stage.

### Why are the changes needed?

There are configurations for the limitation of UI data.
`spark.ui.retainedJobs`, `spark.ui.retainedStages` and `spark.worker.ui.retainedExecutors` are the total max number for one application, while the configuration `spark.ui.retainedTasks` is the max number for one stage.
### Does this PR introduce any user-facing change?

No

### How was this patch tested?

None, just doc.

Closes #27660 from gengliangwang/reviseRetainTask.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-21 10:06:45 +09:00
Dongjoon Hyun fc4e56a54c [SPARK-30884][PYSPARK] Upgrade to Py4J 0.10.9
This PR aims to upgrade Py4J to `0.10.9` for better Python 3.7 support in Apache Spark 3.0.0 (master/branch-3.0). This is not for `branch-2.4`.

- Apache Spark 3.0.0 is using `Py4J 0.10.8.1` (released on 2018-10-21) because `0.10.8.1` was the first official release to support Python 3.7.
    - https://www.py4j.org/changelog.html#py4j-0-10-8-and-py4j-0-10-8-1
- `Py4J 0.10.9` was released on January 25th 2020 with better Python 3.7 support and `magic_member` bug fix.
    - https://github.com/bartdag/py4j/releases/tag/0.10.9
    - https://www.py4j.org/changelog.html#py4j-0-10-9

No.

Pass the Jenkins with the existing tests.

Closes #27641 from dongjoon-hyun/SPARK-30884.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-02-20 09:09:30 -08:00
Maxim Gekk bb40ab09f4 [SPARK-30892][SQL] Exclude spark.sql.variable.substitute.depth from removedSQLConfigs
### What changes were proposed in this pull request?

Exclude the SQL config `spark.sql.variable.substitute.depth` from `SQLConf.removedSQLConfigs`

### Why are the changes needed?
By the #27169, the config was placed to `SQLConf.removedSQLConfigs`. And as a consequence of that when an user set it non-default value (1 for example),  he/she will get an exception. It is acceptable for SQL configs that could impact on the behavior but not for this particular config. Raising of such exception will just make migration to Spark 3.0 more difficult.

### Does this PR introduce any user-facing change?
Yes, before the changes users get an exception when he/she set `spark.sql.variable.substitute.depth` to a value different from `40`.

### How was this patch tested?
Run `spark.conf.set("spark.sql.variable.substitute.depth", 1)` in `spark-shell`.

Closes #27646 from MaxGekk/remove-substitute-depth-conf.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-21 00:44:09 +08:00
Maxim Gekk a551715fd2 [SPARK-29930][SPARK-30416][SQL][FOLLOWUP] Move deprecated/removed config checks from RuntimeConfig to SQLConf
### What changes were proposed in this pull request?
- Output warnings for deprecated SQL configs in `SQLConf. setConfWithCheck()` and in `SQLConf. unsetConf()`
- Throw an exception for removed SQL configs in `SQLConf. setConfWithCheck()` when they set to non-default values
- Remove checking of deprecated and removed SQL configs from RuntimeConfig

### Why are the changes needed?
Currently, warnings/exceptions are printed only when a SQL config is set dynamically, for instance via `spark.conf.set()`. After the changes, removed/deprecated SQL configs will be checked when they set statically. For example:
```
$ bin/spark-shell --conf spark.sql.fromJsonForceNullableSchema=false
scala> spark.emptyDataFrame
java.lang.IllegalArgumentException: Error while instantiating 'org.apache.spark.sql.hive.HiveSessionStateBuilder':
...
Caused by: org.apache.spark.sql.AnalysisException: The SQL config 'spark.sql.fromJsonForceNullableSchema' was removed in the version 3.0.0. It was removed to prevent errors like SPARK-23173 for non-default value.
```
```
$ bin/spark-shell --conf spark.sql.hive.verifyPartitionPath=false
scala> spark.emptyDataFrame
20/02/20 02:10:26 WARN SQLConf: The SQL config 'spark.sql.hive.verifyPartitionPath' has been deprecated in Spark v3.0 and may be removed in the future. This config is replaced by 'spark.files.ignoreMissingFiles'.
```

### Does this PR introduce any user-facing change?
Yes

### How was this patch tested?
By `SQLConfSuite`

Closes #27645 from MaxGekk/remove-sql-configs-followup-2.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-21 00:00:48 +08:00
Wenchen Fan 704d249a56 [SPARK-26071][FOLLOWUP] Improve migration guide of disallowing map type map key
### What changes were proposed in this pull request?

mention the workaround if users do want to use map type as key, and add a test to demonstrate it.

### Why are the changes needed?

it's better to provide an alternative when we ban something.

### Does this PR introduce any user-facing change?

no

### How was this patch tested?

N/A

Closes #27621 from cloud-fan/map.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-20 22:10:04 +08:00
Maxim Gekk 4248b7fbb9 [SPARK-30858][SQL] Make IntegralDivide's dataType independent from SQL config changes
### What changes were proposed in this pull request?
In the PR, I propose to add the `returnLong` parameter to `IntegralDivide`, and pass the value of `spark.sql.legacy.integralDivide.returnBigint` if `returnLong` is not provided on creation of `IntegralDivide`.

### Why are the changes needed?
This allows to avoid the issue when the configuration change between different phases of planning, and this can silently break a query plan which can lead to crashes or data corruption.

OptionsAttachments

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
By `ArithmeticExpressionSuite`.

Closes #27628 from MaxGekk/integral-divide-conf.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-20 21:26:20 +08:00
Gengliang Wang 92d5d40c8e [SPARK-30881][SQL][DOCS] Revise the doc of spark.sql.sources.parallelPartitionDiscovery.threshold
### What changes were proposed in this pull request?

Revise the doc of SQL configuration `spark.sql.sources.parallelPartitionDiscovery.threshold`.
### Why are the changes needed?

The doc of configuration "spark.sql.sources.parallelPartitionDiscovery.threshold" is not accurate on the part "This applies to Parquet, ORC, CSV, JSON and LibSVM data sources".

We should revise it as effective on all the file-based data sources.

### Does this PR introduce any user-facing change?

No

### How was this patch tested?

None. It's just doc.

Closes #27639 from gengliangwang/reviseParallelPartitionDiscovery.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Gengliang Wang <gengliang.wang@databricks.com>
2020-02-20 00:59:22 -08:00
HyukjinKwon 7c4ad6316e [SPARK-29148][CORE][FOLLOW-UP] Don't dynamic allocation warning when it's disabled
### What changes were proposed in this pull request?

Currently, after https://github.com/apache/spark/pull/27313, it shows the warning about dynamic allocation which is disabled by default.

```bash
$ ./bin/spark-shell
```

```
...
20/02/18 11:04:56 WARN ResourceProfile: Please ensure that the number of slots available on your executors is
limited by the number of cores to task cpus and not another custom resource. If cores is not the limiting resource
then dynamic allocation will not work properly!
```

This PR brings back the configuration checking for this warning. Seems mistakenly removed at https://github.com/apache/spark/pull/27313/files#diff-364713d7776956cb8b0a771e9b62f82dL2841

### Why are the changes needed?

To remove false warning.

### Does this PR introduce any user-facing change?

Yes, it will don't show the warning. It's master only change so no user-facing to end users.

### How was this patch tested?

Manually tested.

Closes #27615 from HyukjinKwon/SPARK-29148.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-02-19 23:01:49 -08:00
Wenchen Fan ef90f1422f [SPARK-30878][SQL][DOC] Improve the CREATE TABLE document
### What changes were proposed in this pull request?

Improve the CREATE TABLE document:
1. mention that some clauses can come in as any order.
2. refine the description for some parameters.
3. mention how data source table interacts with data source
4. make the examples consistent between data source and hive serde tables.

### Why are the changes needed?

improve doc

### Does this PR introduce any user-facing change?

no

### How was this patch tested?

N/A

Closes #27638 from cloud-fan/doc.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-20 13:07:52 +08:00
Alex Favaro 96c1a4401d [SPARK-30856][SQL][PYSPARK] Fix SQLContext.getOrCreate() when SparkContext is restarted
### What changes were proposed in this pull request?

As discussed on the Jira ticket, this change clears the SQLContext._instantiatedContext class attribute when the SparkSession is stopped. That way, the attribute will be reset with a new, usable SQLContext when a new SparkSession is started.

### Why are the changes needed?

When the underlying SQLContext is instantiated for a SparkSession, the instance is saved as a class attribute and returned from subsequent calls to SQLContext.getOrCreate(). If the SparkContext is stopped and a new one started, the SQLContext class attribute is never cleared so any code which calls SQLContext.getOrCreate() will get a SQLContext with a reference to the old, unusable SparkContext.

A similar issue was identified and fixed for SparkSession in [SPARK-19055](https://issues.apache.org/jira/browse/SPARK-19055), but the fix did not change SQLContext as well. I ran into this because mllib still [uses](https://github.com/apache/spark/blob/master/python/pyspark/mllib/common.py#L105) SQLContext.getOrCreate() under the hood.

### Does this PR introduce any user-facing change?

No

### How was this patch tested?

A new test was added. I verified that the test fails without the included change.

Closes #27610 from afavaro/restart-sqlcontext.

Authored-by: Alex Favaro <alex.favaro@affirm.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-20 12:21:24 +09:00
Xingbo Jiang e32411eb07 Revert "[SPARK-30667][CORE] Add allGather method to BarrierTaskContext"
This reverts commit af63971cb7.
2020-02-19 17:04:47 -08:00
Huaxin Gao 69367997c3 [SPARK-30802][ML] Use Summarizer instead of MultivariateOnlineSummarizer in Aggregator test suite
### What changes were proposed in this pull request?
There are three changes in this PR:
1. use Summarizer instead of MultivariateOnlineSummarizer in Aggregator test suites (similar to https://github.com/apache/spark/pull/26396)
2. Put common code in ```Summarizer.getRegressionSummarizers``` and ```Summarizer.getClassificationSummarizers```.
3. Move ```MultiClassSummarizer``` from ```LogisticRegression``` to ```ml.stat``` (this seems to be a better place since ```MultiClassSummarizer``` is not only used by ```LogisticRegression``` but also several other classes).

### Why are the changes needed?
Minimize code duplication and improve performance

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
existing test suites.

Closes #27555 from huaxingao/spark-30802.

Authored-by: Huaxin Gao <huaxing@us.ibm.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-19 17:29:52 -06:00
sarthfrey-db af63971cb7 [SPARK-30667][CORE] Add allGather method to BarrierTaskContext
### What changes were proposed in this pull request?

The `allGather` method is added to the `BarrierTaskContext`. This method contains the same functionality as the `BarrierTaskContext.barrier` method; it blocks the task until all tasks make the call, at which time they may continue execution. In addition, the `allGather` method takes an input message. Upon returning from the `allGather` the task receives a list of all the messages sent by all the tasks that made the `allGather` call.

### Why are the changes needed?

There are many situations where having the tasks communicate in a synchronized way is useful. One simple example is if each task needs to start a server to serve requests from one another; first the tasks must find a free port (the result of which is undetermined beforehand) and then start making requests, but to do so they each must know the port chosen by the other task. An `allGather` method would allow them to inform each other of the port they will run on.

### Does this PR introduce any user-facing change?

Yes, an `BarrierTaskContext.allGather` method will be available through the Scala, Java, and Python APIs.

### How was this patch tested?

Most of the code path is already covered by tests to the `barrier` method, since this PR includes a refactor so that much code is shared by the `barrier` and `allGather` methods. However, a test is added to assert that an all gather on each tasks partition ID will return a list of every partition ID.

An example through the Python API:
```python
>>> from pyspark import BarrierTaskContext
>>>
>>> def f(iterator):
...     context = BarrierTaskContext.get()
...     return [context.allGather('{}'.format(context.partitionId()))]
...
>>> sc.parallelize(range(4), 4).barrier().mapPartitions(f).collect()[0]
[u'3', u'1', u'0', u'2']
```

Closes #27395 from sarthfrey/master.

Lead-authored-by: sarthfrey-db <sarth.frey@databricks.com>
Co-authored-by: sarthfrey <sarth.frey@gmail.com>
Signed-off-by: Xiangrui Meng <meng@databricks.com>
(cherry picked from commit 57254c9719)
Signed-off-by: Xiangrui Meng <meng@databricks.com>
2020-02-19 12:10:51 -08:00
herman c92d437c46 [SPARK-30811][SQL] CTE should not cause stack overflow when it refers to non-existent table with same name
### Why are the changes needed?
This ports the tests introduced in 7285eea683 to master to avoid future regressions.

### Background
A query with Common Table Expressions can cause a stack overflow when it contains a CTE that refers a non-existing table with the same name. The name of the table need to have a database qualifier. This is caused by a couple of things:

- CTESubstitution runs analysis on the CTE, but this does not throw an exception because the table has a database qualifier. The reason is that we don't fail is because we re-attempt to resolve the relation in a later rule;
- CTESubstitution replace logic does not check if the table it is replacing has a database, it shouldn't replace the relation if it does. So now we will happily replace nonexist.t with t;

Note that this not an issue for master or the spark-3.0 branch.

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
Added regression test to `AnalysisErrorSuite` and `DataFrameSuite`.

Closes #27635 from hvanhovell/SPARK-30811-master.

Authored-by: herman <herman@databricks.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-02-19 10:17:46 -08:00
Kent Yao 46019b6e6c [MINOR][DOCS] Fix fabric8 version in documentation
### What changes were proposed in this pull request?

fix kubernetes-client version doc

### Why are the changes needed?

correct doc

### Does this PR introduce any user-facing change?

nah
### How was this patch tested?

nah

Closes #27605 from yaooqinn/k8s-version-update.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-19 10:47:59 -06:00
Wenchen Fan c7bece3541 [SPARK-27528][FOLLOWUP] improve migration guide
### What changes were proposed in this pull request?

mention that `INT96` timestamp is still useful for interoperability.

### Why are the changes needed?

Give users more context of the behavior changes.

### Does this PR introduce any user-facing change?

no

### How was this patch tested?

N/A

Closes #27622 from cloud-fan/parquet.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-19 22:26:56 +08:00
Prakhar Jain e086951349 [SPARK-30786][CORE] Fix Block replication failure propogation issue in BlockManager
### What changes were proposed in this pull request?
Currently the uploadBlockSync api in BlockTransferService always succeeds irrespective of whether the BlockManager was able to successfully replicate a block on peer block manager or not. This PR makes sure that the NettyBlockRpcServer invokes onFailure callback when it is not able to replicate the block to itself because of any reason. The onFailure callback makes sure that the BlockTransferService on client side gets the failure and retry replication the Block on some other BlockManager.

### Why are the changes needed?
Currently the Spark Block replication retry logic is not working correctly. It doesn't retry on other Block managers even when replication fails on 1 of the peers.

A user can cache an DataFrame with different replication factor. Ex - df.persist(StorageLevel.MEMORY_ONLY_2) - This will cache each partition at two different BlockManagers. When a DataFrame partition is computed first time, it is firstly stored locally on the local BlockManager and then it is replicated to other block managers based on replication factor config. The replication of block to other block managers might fail because of memory/network etc issues and so there is already provision to retry the replication on some other peer based on "spark.storage.maxReplicationFailures" config, Currently when this replication fails, the client does not know about the failure and so it doesn't retry on other peers. This PR fixes this issue.

### Does this PR introduce any user-facing change?
No.

### How was this patch tested?
Added Unit Test.

Closes #27539 from prakharjain09/bm_replicate.

Authored-by: Prakhar Jain <prakharjain09@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-19 20:23:22 +08:00
Nicholas Chammas 2ab8d674ba [SPARK-30731] Update deprecated Mkdocs option
Split from #27534.

### What changes were proposed in this pull request?

This PR updates a deprecated Mkdocs option to use the new name.

### Why are the changes needed?

This change will prevent the docs from failing to build when we update to a version of Mkdocs that no longer supports the deprecated option.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

I built the docs locally and reviewed them in my browser.

Closes #27626 from nchammas/SPARK-30731-mkdocs-dep-opt.

Authored-by: Nicholas Chammas <nicholas.chammas@liveramp.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-19 17:28:58 +09:00
jiake 10a4eafcfe [SPARK-30812][SQL] update the skew join configs by adding the prefix "skewedJoinOptimization"
### What changes were proposed in this pull request?
This is a follow up in [PR#27563](https://github.com/apache/spark/pull/27563).
This PR adds the prefix of "skewedJoinOptimization" in the skew join related configs.

### Why are the changes needed?
address remaining address

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
only update config and no need new ut.

Closes #27630 from JkSelf/renameskewjoinconfig.

Authored-by: jiake <ke.a.jia@intel.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-19 15:55:29 +08:00
LantaoJin c0715221b2 [SPARK-30785][SQL] Create table like should keep tracksPartitionsInCatalog same with source table
### What changes were proposed in this pull request?
Table generated by `CREATE TABLE LIKE` a partitioned table is a partitioned table. But when run `ALTER TABLE ADD PARTITION`, it will throw `AnalysisException: ALTER TABLE ADD PARTITION is not allowed`. That's because the default value of `tracksPartitionsInCatalog` from `CREATE TABLE LIKE` always is false.

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
Add a unit test.

Closes #27538 from LantaoJin/SPARK-30785.

Authored-by: LantaoJin <jinlantao@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-19 15:05:34 +08:00
beliefer 0894dbab2c [MINOR][SQL] Improve readability for window execution
### What changes were proposed in this pull request?
I read the comments of `WindowExec` and found some comment will cause confusion and another need to improve.

### Why are the changes needed?
This PR will enhance the readability and let developer works more easy

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
No need

Closes #27431 from beliefer/improve-window-readability.

Authored-by: beliefer <beliefer@163.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-19 14:26:27 +08:00
HyukjinKwon e065e22e5e [SPARK-30861][PYTHON][SQL] Deprecate constructor of SQLContext and getOrCreate in SQLContext at PySpark
### What changes were proposed in this pull request?

This PR proposes to deprecate the APIs at `SQLContext` removed in SPARK-25908. We should remove equivalent APIs; however, seems we missed to deprecate.

While I am here, I fix one more issue. After SPARK-25908, `sc._jvm.SQLContext.getOrCreate` dose not exist anymore. So,

```python
from pyspark.sql import SQLContext
from pyspark import SparkContext
sc = SparkContext.getOrCreate()
SQLContext.getOrCreate(sc).range(10).show()
```

throws an exception as below:

```
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/.../spark/python/pyspark/sql/context.py", line 110, in getOrCreate
    jsqlContext = sc._jvm.SQLContext.getOrCreate(sc._jsc.sc())
  File "/.../spark/python/lib/py4j-0.10.8.1-src.zip/py4j/java_gateway.py", line 1516, in __getattr__
py4j.protocol.Py4JError: org.apache.spark.sql.SQLContext.getOrCreate does not exist in the JVM
```

After this PR:

```
/.../spark/python/pyspark/sql/context.py:113: DeprecationWarning: Deprecated in 3.0.0. Use SparkSession.builder.getOrCreate() instead.
  DeprecationWarning)
+---+
| id|
+---+
|  0|
|  1|
|  2|
|  3|
|  4|
|  5|
|  6|
|  7|
|  8|
|  9|
+---+
```

In case of the constructor of `SQLContext`, after this PR:

```python
from pyspark.sql import SQLContext
sc = SparkContext.getOrCreate()
SQLContext(sc)
```

```
/.../spark/python/pyspark/sql/context.py:77: DeprecationWarning: Deprecated in 3.0.0. Use SparkSession.builder.getOrCreate() instead.
  DeprecationWarning)
```

### Why are the changes needed?

To promote to use SparkSession, and keep the API party consistent with Scala side.

### Does this PR introduce any user-facing change?

Yes, it will show deprecation warning to users.

### How was this patch tested?

Manually tested as described above. Unittests were also added.

Closes #27614 from HyukjinKwon/SPARK-30861.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-19 11:17:47 +09:00
Wenchen Fan 1b67d546bd revert SPARK-29663 and SPARK-29688
### What changes were proposed in this pull request?

This PR reverts https://github.com/apache/spark/pull/26325 and https://github.com/apache/spark/pull/26347

### Why are the changes needed?

When we do sum/avg, we need a wider type of input to hold the sum value, to reduce the possibility of overflow. For example, we use long to hold the sum of integral inputs, use double to hold the sum of float/double.

However, we don't have a wider type of interval. Also the semantic is unclear: what if the days field overflows but the months field doesn't? Currently the avg of `1 month` and `2 month` is `1 month 15 days`, which assumes 1 month has 30 days and we should avoid this assumption.

### Does this PR introduce any user-facing change?

yes, remove 2 features added in 3.0

### How was this patch tested?

N/A

Closes #27619 from cloud-fan/revert.

Authored-by: Wenchen Fan <wenchen@databricks.com>
Signed-off-by: herman <herman@databricks.com>
2020-02-18 21:19:57 +01:00
yi.wu 68d7edf949 [SPARK-30812][SQL][CORE] Revise boolean config name to comply with new config naming policy
### What changes were proposed in this pull request?

Revise below config names to comply with [new config naming policy](http://apache-spark-developers-list.1001551.n3.nabble.com/DISCUSS-naming-policy-of-Spark-configs-td28875.html):

SQL:
* spark.sql.execution.subquery.reuse.enabled / [SPARK-27083](https://issues.apache.org/jira/browse/SPARK-27083)
* spark.sql.legacy.allowNegativeScaleOfDecimal.enabled / [SPARK-30252](https://issues.apache.org/jira/browse/SPARK-30252)
* spark.sql.adaptive.optimizeSkewedJoin.enabled / [SPARK-29544](https://issues.apache.org/jira/browse/SPARK-29544)
* spark.sql.legacy.property.nonReserved / [SPARK-30183](https://issues.apache.org/jira/browse/SPARK-30183)
* spark.sql.streaming.forceDeleteTempCheckpointLocation.enabled / [SPARK-26389](https://issues.apache.org/jira/browse/SPARK-26389)
* spark.sql.analyzer.failAmbiguousSelfJoin.enabled / [SPARK-28344](https://issues.apache.org/jira/browse/SPARK-28344)
* spark.sql.adaptive.shuffle.reducePostShufflePartitions.enabled / [SPARK-30074](https://issues.apache.org/jira/browse/SPARK-30074)
* spark.sql.execution.pandas.arrowSafeTypeConversion / [SPARK-25811](https://issues.apache.org/jira/browse/SPARK-25811)
* spark.sql.legacy.looseUpcast / [SPARK-24586](https://issues.apache.org/jira/browse/SPARK-24586)
* spark.sql.legacy.arrayExistsFollowsThreeValuedLogic / [SPARK-28052](https://issues.apache.org/jira/browse/SPARK-28052)
* spark.sql.sources.ignoreDataLocality.enabled / [SPARK-29189](https://issues.apache.org/jira/browse/SPARK-29189)
* spark.sql.adaptive.shuffle.fetchShuffleBlocksInBatch.enabled / [SPARK-9853](https://issues.apache.org/jira/browse/SPARK-9853)

CORE:
* spark.eventLog.erasureCoding.enabled / [SPARK-25855](https://issues.apache.org/jira/browse/SPARK-25855)
* spark.shuffle.readHostLocalDisk.enabled / [SPARK-30235](https://issues.apache.org/jira/browse/SPARK-30235)
* spark.scheduler.listenerbus.logSlowEvent.enabled / [SPARK-29001](https://issues.apache.org/jira/browse/SPARK-29001)
* spark.resources.coordinate.enable / [SPARK-27371](https://issues.apache.org/jira/browse/SPARK-27371)
* spark.eventLog.logStageExecutorMetrics.enabled / [SPARK-23429](https://issues.apache.org/jira/browse/SPARK-23429)

### Why are the changes needed?

To comply with the config naming policy.

### Does this PR introduce any user-facing change?

No. Configurations listed above are all newly added in Spark 3.0.

### How was this patch tested?

Pass Jenkins.

Closes #27563 from Ngone51/revise_boolean_conf_name.

Authored-by: yi.wu <yi.wu@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 20:39:50 +08:00
yi.wu 643a480b11 [SPARK-30863][SQL] Distinguish Cast and AnsiCast in toString
### What changes were proposed in this pull request?

Prefix by `ansi_`  in `toString` if it's a `AnsiCast` or ansi enabled `Cast`.

E.g. run `spark.sql("select cast('51' as int)").queryExecution.analyzed` under ansi mode.

Before this PR:
```
Project [cast(51 as int) AS CAST(51 AS INT)#0]
+- OneRowRelation
```

After this PR:
```
Project [ansi_cast(51 as int) AS CAST(51 AS INT)#0]
+- OneRowRelation
```

### Why are the changes needed?

This is useful while comparing `LogicalPlan`s literally.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Pass Jenkins.

Closes #27608 from Ngone51/ansi_cast_tostring.

Authored-by: yi.wu <yi.wu@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 16:10:43 +08:00
David Toneian 504b5135d0 [SPARK-30859][PYSPARK][DOCS][MINOR] Fixed docstring syntax issues preventing proper compilation of documentation
This commit is published into the public domain.

### What changes were proposed in this pull request?
Some syntax issues in docstrings have been fixed.

### Why are the changes needed?
In some places, the documentation did not render as intended, e.g. parameter documentations were not formatted as such.

### Does this PR introduce any user-facing change?
Slight improvements in documentation.

### How was this patch tested?
Manual testing. No new Sphinx warnings arise due to this change.

Closes #27613 from DavidToneian/SPARK-30859.

Authored-by: David Toneian <david@toneian.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-18 16:46:45 +09:00
HyukjinKwon 9618806f44 [SPARK-30847][SQL] Take productPrefix into account in MurmurHash3.productHash
### What changes were proposed in this pull request?

This PR proposes to port Scala's bugfix https://github.com/scala/scala/pull/7693 (Scala 2.13) to address https://github.com/scala/bug/issues/10495 issue.

In short, it is possible for different product instances having the same children to have the same hash. See:

```scala
scala> spark.range(1).selectExpr("id - 1").queryExecution.analyzed.semanticHash()
res0: Int = -565572825

scala> spark.range(1).selectExpr("id + 1").queryExecution.analyzed.semanticHash()
res1: Int = -565572825
```

### Why are the changes needed?

It was found during the review of https://github.com/apache/spark/pull/27565. We should better produce different hash for different objects.

### Does this PR introduce any user-facing change?

No, it's not identified. Possibly performance related issue.

### How was this patch tested?

Manually tested, and unittest was added.

Closes #27601 from HyukjinKwon/SPARK-30847.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 14:28:44 +08:00
Terry Kim 5866bc77d7 [SPARK-30814][SQL] ALTER TABLE ... ADD COLUMN position should be able to reference columns being added
### What changes were proposed in this pull request?

In ALTER TABLE, a column in ADD COLUMNS can depend on the position of a column that is just being added. For example, for a table with the following schema:
```
root:
  - a: string
  - b: long
```
, the following should work:
```
ALTER TABLE t ADD COLUMNS (x int AFTER a, y int AFTER x)
```
Currently, the above statement will throw an exception saying that AFTER x cannot be resolved, because x doesn't exist yet. This PR proposes to fix this issue.

### Why are the changes needed?

To fix a bug described above.

### Does this PR introduce any user-facing change?

Yes, now
```
ALTER TABLE t ADD COLUMNS (x int AFTER a, y int AFTER x)
```
works as expected.

### How was this patch tested?

Added new tests

Closes #27584 from imback82/alter_table_pos_fix.

Authored-by: Terry Kim <yuminkim@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 13:01:45 +08:00
Liang Zhang d8c0599e54 [SPARK-30791][SQL][PYTHON] Add 'sameSemantics' and 'sementicHash' methods in Dataset
### What changes were proposed in this pull request?
This PR added two DeveloperApis to the Dataset[T] class. Both methods are just exposing lower-level methods to the Dataset[T] class.

### Why are the changes needed?
They are useful for checking whether two dataframes are the same when implementing dataframe caching in python, and also get a unique ID. It's easier to use if we wrap the lower-level APIs.

### Does this PR introduce any user-facing change?
```
scala> val df1 = Seq((1,2),(4,5)).toDF("col1", "col2")
df1: org.apache.spark.sql.DataFrame = [col1: int, col2: int]

scala> val df2 = Seq((1,2),(4,5)).toDF("col1", "col2")
df2: org.apache.spark.sql.DataFrame = [col1: int, col2: int]

scala> val df3 = Seq((0,2),(4,5)).toDF("col1", "col2")
df3: org.apache.spark.sql.DataFrame = [col1: int, col2: int]

scala> val df4 = Seq((0,2),(4,5)).toDF("col0", "col2")
df4: org.apache.spark.sql.DataFrame = [col0: int, col2: int]

scala> df1.semanticHash
res0: Int = 594427822

scala> df2.semanticHash
res1: Int = 594427822

scala> df1.sameSemantics(df2)
res2: Boolean = true

scala> df1.sameSemantics(df3)
res3: Boolean = false

scala> df3.semanticHash
res4: Int = -1592702048

scala> df4.semanticHash
res5: Int = -1592702048

scala> df4.sameSemantics(df3)
res6: Boolean = true
```

### How was this patch tested?
Unit test in scala and doctest in python.

Note: comments are copied from the corresponding lower-level APIs.
Note: There are some issues to be fixed that would improve the hash collision rate: https://github.com/apache/spark/pull/27565#discussion_r379881028

Closes #27565 from liangz1/df-same-result.

Authored-by: Liang Zhang <liang.zhang@databricks.com>
Signed-off-by: WeichenXu <weichen.xu@databricks.com>
2020-02-18 09:22:26 +08:00
Nicholas Chammas 4ed9b88996 [SPARK-30832][DOCS] SQL function doc headers should link to anchors
### Why are the changes needed?

In most of our docs, you can click on a heading to immediately get an anchor link to that specific section of the docs. This is very handy when you are reading the docs and want to share a link to a specific part.

The SQL function docs are lacking this. This PR adds this convenience to the SQL function docs.

Here's the impact on the generated HTML.

Before this PR:

```html
<h3 id="array_join">array_join</h3>
```

After this PR:

```html
<h3 id="array_join"><a class="toclink" href="#array_join">array_join</a></h3>
```

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

I built the docs manually and reviewed the results in my browser.

Closes #27585 from nchammas/SPARK-30832-sql-doc-headers.

Authored-by: Nicholas Chammas <nicholas.chammas@gmail.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-17 19:19:28 -06:00
beliefer d8d3ce5c76 [SPARK-30825][SQL][DOC] Update documents information for window function
### What changes were proposed in this pull request?
I checked the all the window function and found all of them not add parameter information and version information to the document.
This PR will make a supplement.

### Why are the changes needed?
Documentation is missing and does not meet new standards.

### Does this PR introduce any user-facing change?
Yes. User will face the information of parameters and version.

### How was this patch tested?
Exists UT

Closes #27572 from beliefer/add_since_for_window_function.

Authored-by: beliefer <beliefer@163.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-18 09:44:34 +09:00
Ajith 657d151395 [SPARK-29174][SQL] Support LOCAL in INSERT OVERWRITE DIRECTORY to data source
### What changes were proposed in this pull request?
`INSERT OVERWRITE LOCAL DIRECTORY` is supported with ensuring the provided path is always using `file://` as scheme and removing the check which throws exception if we do insert overwrite by mentioning directory with `LOCAL` syntax

### Why are the changes needed?
without the modification in PR, ``` insert overwrite local directory <location> using ```

throws exception

```
Error: org.apache.spark.sql.catalyst.parser.ParseException:

LOCAL is not supported in INSERT OVERWRITE DIRECTORY to data source(line 1, pos 0)
```
which was introduced in https://github.com/apache/spark/pull/18975, but this restriction is not needed, hence dropping the same.
Keep behaviour consistent for local and remote file-system in  `INSERT OVERWRITE DIRECTORY`

### Does this PR introduce any user-facing change?
Yes, after this change `INSERT OVERWRITE LOCAL DIRECTORY` will not throw exception

### How was this patch tested?
Added UT

Closes #27039 from ajithme/insertoverwrite2.

Authored-by: Ajith <ajith2489@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-18 09:42:31 +09:00
Ajith 2854091d12 [SPARK-22590][SQL] Copy sparkContext.localproperties to child thread in BroadcastExchangeExec.executionContext
### What changes were proposed in this pull request?
In `org.apache.spark.sql.execution.exchange.BroadcastExchangeExec#relationFuture` make a copy of `org.apache.spark.SparkContext#localProperties` and pass it to the broadcast execution thread in `org.apache.spark.sql.execution.exchange.BroadcastExchangeExec#executionContext`

### Why are the changes needed?
When executing `BroadcastExchangeExec`, the relationFuture is evaluated via a separate thread. The threads inherit the `localProperties` from `sparkContext` as they are the child threads.
These threads are created in the executionContext (thread pools). Each Thread pool has a default `keepAliveSeconds` of 60 seconds for idle threads.
Scenarios where the thread pool has threads which are idle and reused for a subsequent new query, the thread local properties will not be inherited from spark context (thread properties are inherited only on thread creation) hence end up having old or no properties set. This will cause taskset properties to be missing when properties are transferred by child thread via `sparkContext.runJob/submitJob`

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
Added UT

Closes #27266 from ajithme/broadcastlocalprop.

Authored-by: Ajith <ajith2489@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 02:26:52 +08:00
Maxim Gekk afaeb29599 [SPARK-30808][SQL] Enable Java 8 time API in Thrift server
### What changes were proposed in this pull request?
- Set `spark.sql.datetime.java8API.enabled` to `true` in `hiveResultString()`, and restore it back at the end of the call.
- Convert collected `java.time.Instant` & `java.time.LocalDate` to `java.sql.Timestamp` and `java.sql.Date` for correct formatting.

### Why are the changes needed?
Because of textual representation of timestamps/dates before 1582 year is incorrect:
```shell
$ export TZ="America/Los_Angeles"
$ ./bin/spark-sql -S
```
```sql
spark-sql> set spark.sql.session.timeZone=America/Los_Angeles;
spark.sql.session.timeZone	America/Los_Angeles
spark-sql> SELECT DATE_TRUNC('MILLENNIUM', DATE '1970-03-20');
1001-01-01 00:07:02
```
It must be 1001-01-01 00:**00:00**.

### Does this PR introduce any user-facing change?
Yes. After the changes:
```shell
$ export TZ="America/Los_Angeles"
$ ./bin/spark-sql -S
```
```sql
spark-sql> set spark.sql.session.timeZone=America/Los_Angeles;
spark.sql.session.timeZone	America/Los_Angeles
spark-sql> SELECT DATE_TRUNC('MILLENNIUM', DATE '1970-03-20');
1001-01-01 00:00:00
```

### How was this patch tested?
By running hive-thiftserver tests. In particular:
```
./build/sbt -Phadoop-2.7 -Phive-2.3 -Phive-thriftserver "hive-thriftserver/test:testOnly *SparkThriftServerProtocolVersionsSuite"
```

Closes #27552 from MaxGekk/hive-thriftserver-java8-time-api.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 02:15:44 +08:00
yi.wu a1d536cb3e [SPARK-15616][FOLLOW-UP][SQL] Sub Optimizer should include super.postHocOptimizationBatches
### What changes were proposed in this pull request?

Let sub optimizer's  `postHocOptimizationBatches` also includes super's `postHocOptimizationBatches`.

### Why are the changes needed?

It's necessary according to the design of catalyst optimizer.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Pass jenkins.

Closes #27607 from Ngone51/spark_15616_followup.

Authored-by: yi.wu <yi.wu@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 01:52:23 +08:00
Yuanjian Li 5ffc5ff55e [SPARK-11150][SQL][FOLLOWUP] Move sql/dynamicpruning to sql/execution/dynamicpruning
### What changes were proposed in this pull request?
Follow-up work for #25600. In this PR, we move `sql/dynamicpruning` to `sql/execution/dynamicpruning`.

### Why are the changes needed?
Fix the unexpected public APIs in 3.0.0 #27560.

### Does this PR introduce any user-facing change?
No.

### How was this patch tested?
Existing UT.

Closes #27581 from xuanyuanking/SPARK-11150-follow.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 01:44:14 +08:00
Yuming Wang 76ddb6d835 [SPARK-30755][SQL] Update migration guide and add actionable exception for HIVE-15167
### What changes were proposed in this pull request?
[HIVE-15167](https://issues.apache.org/jira/browse/HIVE-15167) removed the `SerDe` interface. This may break custom `SerDe` builds for Hive 1.2. This PR update the migration guide for this change.

### Why are the changes needed?

Otherwise:
```
2020-01-27 05:11:20.446 - stderr> 20/01/27 05:11:20 INFO DAGScheduler: ResultStage 2 (main at NativeMethodAccessorImpl.java:0) failed in 1.000 s due to Job aborted due to stage failure: Task 0 in stage 2.0 failed 4 times, most recent failure: Lost task 0.3 in stage 2.0 (TID 13, 10.110.21.210, executor 1): java.lang.NoClassDefFoundError: org/apache/hadoop/hive/serde2/SerDe
  2020-01-27 05:11:20.446 - stderr>  at java.lang.ClassLoader.defineClass1(Native Method)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.ClassLoader.defineClass(ClassLoader.java:756)
  2020-01-27 05:11:20.446 - stderr>  at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
  2020-01-27 05:11:20.446 - stderr>  at java.net.URLClassLoader.defineClass(URLClassLoader.java:468)
  2020-01-27 05:11:20.446 - stderr>  at java.net.URLClassLoader.access$100(URLClassLoader.java:74)
  2020-01-27 05:11:20.446 - stderr>  at java.net.URLClassLoader$1.run(URLClassLoader.java:369)
  2020-01-27 05:11:20.446 - stderr>  at java.net.URLClassLoader$1.run(URLClassLoader.java:363)
  2020-01-27 05:11:20.446 - stderr>  at java.security.AccessController.doPrivileged(Native Method)
  2020-01-27 05:11:20.446 - stderr>  at java.net.URLClassLoader.findClass(URLClassLoader.java:362)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
  2020-01-27 05:11:20.446 - stderr>  at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:352)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.ClassLoader.loadClass(ClassLoader.java:405)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.Class.forName0(Native Method)
  2020-01-27 05:11:20.446 - stderr>  at java.lang.Class.forName(Class.java:348)
  2020-01-27 05:11:20.446 - stderr>  at org.apache.hadoop.hive.ql.plan.TableDesc.getDeserializerClass(TableDesc.java:76)
.....
```

### Does this PR introduce any user-facing change?
No.

### How was this patch tested?
Manual test

Closes #27492 from wangyum/SPARK-30755.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-02-17 09:26:56 -08:00
wangguangxin.cn 0ae3ff60c4 [SPARK-30806][SQL] Evaluate once per group in UnboundedWindowFunctionFrame
### What changes were proposed in this pull request?
We only need to do aggregate evaluation once per group in `UnboundedWindowFunctionFrame`

### Why are the changes needed?
Currently, in `UnboundedWindowFunctionFrame.write`,it re-evaluate the processor for each row in a group, which is not necessary in fact which I'll address later. It hurts performance when the evaluation is time-consuming (for example, Percentile's eval need to sort its buffer and do some calculation). In our production, there is a percentile with window operation sql,  it costs more than 10 hours in SparkSQL while 10min in Hive.

In fact, `UnboundedWindowFunctionFrame` can be treated as `SlidingWindowFunctionFrame` with `lbound = UnboundedPreceding` and `ubound = UnboundedFollowing`, just as its comments. In that case, `SlidingWindowFunctionFrame` also only do evaluation once for each group.

The performance issue can be reproduced by running the follow scripts in local spark-shell
```
spark.range(100*100).map(i => (i, "India")).toDF("uv", "country").createOrReplaceTempView("test")
sql("select uv, country, percentile(uv, 0.95) over (partition by country) as ptc95 from test").collect.foreach(println)
```
Before this patch, the sql costs **128048 ms**.
With this patch,  the sql costs **3485 ms**.

If we increase the data size to 1000*1000 for example, then spark cannot even produce result without this patch(I'v waited for several hours).

### Does this PR introduce any user-facing change?
NO

### How was this patch tested?
Existing UT

Closes #27558 from WangGuangxin/windows.

Authored-by: wangguangxin.cn <wangguangxin.cn@gmail.com>
Signed-off-by: herman <herman@databricks.com>
2020-02-17 18:15:54 +01:00
Yuanjian Li e4a541b278 [SPARK-30829][SQL] Define LegacyBehaviorPolicy enumeration as the common value for result change configs
### What changes were proposed in this pull request?
Define a new enumeration `LegacyBehaviorPolicy` in SQLConf, it will be used as the common value for result change configs.

### Why are the changes needed?
During API auditing for the 3.0 release, we found several new approaches that will change the results silently. For these features, we need a common three-value config.

### Does this PR introduce any user-facing change?
Yes, original config `spark.sql.legacy.ctePrecedence.enabled` change to `spark.sql.legacy.ctePrecedencePolicy`.

### How was this patch tested?
Existing UT.

Closes #27579 from xuanyuanking/SPARK-30829.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-18 00:52:05 +08:00
zhengruifeng 0a4080ec3b [SPARK-30736][ML] One-Pass ChiSquareTest
### What changes were proposed in this pull request?
1, distributedly gather matrix `contingency` of each feature
2, distributedly compute the results and then collect them back to the driver

### Why are the changes needed?
existing impl is not efficient:
1, it directly collect matrix `contingency` of partial featues to driver and compute the corresponding result on one pass;
2, a matrix  `contingency` of a featues is of size numDistinctValues X numDistinctLabels, so only 1000 matrices can be collected at a time;

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
existing testsuites

Closes #27461 from zhengruifeng/chisq_opt.

Authored-by: zhengruifeng <ruifengz@foxmail.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-17 09:41:38 -06:00
Arwin Tio 25e9156bc0 [SPARK-29089][SQL] Parallelize blocking FileSystem calls in DataSource#checkAndGlobPathIfNecessary
### What changes were proposed in this pull request?
See JIRA: https://issues.apache.org/jira/browse/SPARK-29089
Mailing List: http://apache-spark-developers-list.1001551.n3.nabble.com/DataFrameReader-bottleneck-in-DataSource-checkAndGlobPathIfNecessary-when-reading-S3-files-td27828.html

When using DataFrameReader#csv to read many files on S3, globbing and fs.exists on DataSource#checkAndGlobPathIfNecessary becomes a bottleneck.

From the mailing list discussions, an improvement that can be made is to parallelize the blocking FS calls:

> - have SparkHadoopUtils differentiate between files returned by globStatus(), and which therefore exist, and those which it didn't glob for -it will only need to check those.
> - add parallel execution to the glob and existence checks

### Why are the changes needed?

Verifying/globbing files happens on the driver, and if this operations take a long time (for example against S3), then the entire cluster has to wait, potentially sitting idle. This change hopes to make this process faster.

### Does this PR introduce any user-facing change?

No

### How was this patch tested?

I added a test suite `DataSourceSuite` - open to suggestions for better naming.

See [here](https://github.com/apache/spark/pull/25899#issuecomment-534380034) and [here](https://github.com/apache/spark/pull/25899#issuecomment-534069194) for some measurements

Closes #25899 from cozos/master.

Lead-authored-by: Arwin Tio <Arwin.tio@adroll.com>
Co-authored-by: Arwin Tio <arwin.tio@hotmail.com>
Co-authored-by: Arwin Tio <arwin.tio@adroll.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-02-17 09:30:35 -06:00
Maxim Gekk 06217cfded [SPARK-30793][SQL] Fix truncations of timestamps before the epoch to minutes and seconds
### What changes were proposed in this pull request?
In the PR, I propose to replace `%` by `Math.floorMod` in `DateTimeUtils.truncTimestamp` for the `SECOND` and `MINUTE` levels.

### Why are the changes needed?
This fixes the issue of incorrect truncation of timestamps before the epoch `1970-01-01T00:00:00.000000Z` to the `SECOND` and `MINUTE` levels. For example, timestamps after the epoch are truncated by cutting off the rest part of the timestamp:
```sql
spark-sql> select date_trunc('SECOND', '2020-02-11 00:01:02.123');
2020-02-11 00:01:02
```
but seconds in the truncated timestamp before the epoch are increased by 1:
```sql
spark-sql> select date_trunc('SECOND', '1960-02-11 00:01:02.123');
1960-02-11 00:01:03
```

### Does this PR introduce any user-facing change?
Yes. After the changes, the example above outputs correct result:
```sql
spark-sql> select date_trunc('SECOND', '1960-02-11 00:01:02.123');
1960-02-11 00:01:02
```

### How was this patch tested?
Added new tests to `DateFunctionsSuite`.

Closes #27543 from MaxGekk/fix-second-minute-truc.

Authored-by: Maxim Gekk <max.gekk@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-17 22:51:56 +08:00
Yuanjian Li ab186e3659 [SPARK-25829][SQL] Add config spark.sql.legacy.allowDuplicatedMapKeys and change the default behavior
### What changes were proposed in this pull request?
This is a follow-up for #23124, add a new config `spark.sql.legacy.allowDuplicatedMapKeys` to control the behavior of removing duplicated map keys in build-in functions. With the default value `false`, Spark will throw a RuntimeException while duplicated keys are found.

### Why are the changes needed?
Prevent silent behavior changes.

### Does this PR introduce any user-facing change?
Yes, new config added and the default behavior for duplicated map keys changed to RuntimeException thrown.

### How was this patch tested?
Modify existing UT.

Closes #27478 from xuanyuanking/SPARK-25892-follow.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-17 22:06:58 +08:00
Liupengcheng 5b873420b0 [SPARK-30346][CORE] Improve logging when events dropped
### What changes were proposed in this pull request?

Make logging events dropping every 60s works fine, the orignal implementaion some times not working due to susequent events comming and updating the DroppedEventCounter

### Why are the changes needed?

Currenly, the logging may be skipped and delayed a long time under high concurrency, that make debugging hard. So This PR will try to fix it.

### Does this PR introduce any user-facing change?

No

### How was this patch tested?

NA

Closes #27002 from liupc/Improve-logging-dropped-events-and-logging-threadDump.

Authored-by: Liupengcheng <liupengcheng@xiaomi.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-17 20:16:31 +08:00
Jungtaek Lim (HeartSaVioR) 5445fe9288 [SPARK-30827][DOCS] Document direct relationship among configurations in "spark.history.*" namespace
### What changes were proposed in this pull request?

This patch adds direct relationship among configurations under "spark.history" namespace.

### Why are the changes needed?

Refer the discussion thread: https://lists.apache.org/thread.html/r43c4e57cace116aca1f0f099e8a577cf202859e3671a04077867b84a%40%3Cdev.spark.apache.org%3E

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Locally ran jekyll and confirmed. Screenshots for the modified spots:

<img width="1159" alt="Screen Shot 2020-02-15 at 8 20 14 PM" src="https://user-images.githubusercontent.com/1317309/74587003-d5922b00-5030-11ea-954b-ee37fc08470a.png">
<img width="1158" alt="Screen Shot 2020-02-15 at 8 20 44 PM" src="https://user-images.githubusercontent.com/1317309/74587005-d62ac180-5030-11ea-98fc-98b1c9d83ff4.png">
<img width="1149" alt="Screen Shot 2020-02-15 at 8 19 56 PM" src="https://user-images.githubusercontent.com/1317309/74587002-d1660d80-5030-11ea-84b5-dec3d7f5c97c.png">

Closes #27575 from HeartSaVioR/SPARK-30827.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan.opensource@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-17 20:45:24 +09:00
Jungtaek Lim (HeartSaVioR) 446b2d2653 [SPARK-28869][DOCS][FOLLOWUP] Add direct relationship between configs for rolling event log
### What changes were proposed in this pull request?

This patch addresses the post-hoc review comment linked here - https://github.com/apache/spark/pull/25670#discussion_r373304076

### Why are the changes needed?

We would like to explicitly document the direct relationship before we finish up structuring of configurations.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

N/A

Closes #27576 from HeartSaVioR/SPARK-28869-FOLLOWUP-doc.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan.opensource@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-17 20:41:56 +09:00
Takeshi Yamamuro 29b3e42779 [MINOR] Update the PR template for adding a link to the configuration naming guideline
### What changes were proposed in this pull request?

This is a follow-up of #27577. This pr intends to add a link to the configuration naming guideline in `.github/PULL_REQUEST_TEMPLATE`.

### Why are the changes needed?

For reminding developers to follow the naming rules.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

N/A

Closes #27602 from maropu/pr27577-FOLLOWUP.

Authored-by: Takeshi Yamamuro <yamamuro@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-17 16:05:08 +09:00