Commit graph

3608 commits

Author SHA1 Message Date
Pravin Gadakh dae538a4d7 [SPARK-14613][ML] Add @Since into the matrix and vector classes in spark-mllib-local
## What changes were proposed in this pull request?

This PR adds `since` tag into the matrix and vector classes in spark-mllib-local.

## How was this patch tested?

Scala-style checks passed.

Author: Pravin Gadakh <prgadakh@in.ibm.com>

Closes #12416 from pravingadakh/SPARK-14613.
2016-04-28 15:59:18 -07:00
Tathagata Das 0ee5419b6c [SPARK-14970][SQL] Prevent DataSource from enumerates all files in a directory if there is user specified schema
## What changes were proposed in this pull request?
The FileCatalog object gets created even if the user specifies schema, which means files in the directory is enumerated even thought its not necessary. For large directories this is very slow. User would want to specify schema in such scenarios of large dirs, and this defeats the purpose quite a bit.

## How was this patch tested?
Hard to test this with unit test.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12748 from tdas/SPARK-14970.
2016-04-28 12:59:08 -07:00
Gregory Hart 12c360c057 [SPARK-14965][SQL] Indicate an exception is thrown for a missing struct field
## What changes were proposed in this pull request?

Fix to ScalaDoc for StructType.

## How was this patch tested?

Built locally.

Author: Gregory Hart <greg.hart@thinkbiganalytics.com>

Closes #12758 from freastro/hotfix/SPARK-14965.
2016-04-28 11:21:43 -07:00
Liang-Chi Hsieh 7c6937a885 [SPARK-14487][SQL] User Defined Type registration without SQLUserDefinedType annotation
## What changes were proposed in this pull request?

Currently we use `SQLUserDefinedType` annotation to register UDTs for user classes. However, by doing this, we add Spark dependency to user classes.

For some user classes, it is unnecessary to add such dependency that will increase deployment difficulty.

We should provide alternative approach to register UDTs for user classes without `SQLUserDefinedType` annotation.

## How was this patch tested?

`UserDefinedTypeSuite`

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12259 from viirya/improve-sql-usertype.
2016-04-28 01:14:49 -07:00
Wenchen Fan bf5496dbda [SPARK-14654][CORE] New accumulator API
## What changes were proposed in this pull request?

This PR introduces a new accumulator API  which is much simpler than before:

1. the type hierarchy is simplified, now we only have an `Accumulator` class
2. Combine `initialValue` and `zeroValue` concepts into just one concept: `zeroValue`
3. there in only one `register` method, the accumulator registration and cleanup registration are combined.
4. the `id`,`name` and `countFailedValues` are combined into an `AccumulatorMetadata`, and is provided during registration.

`SQLMetric` is a good example to show the simplicity of this new API.

What we break:

1. no `setValue` anymore. In the new API, the intermedia type can be different from the result type, it's very hard to implement a general `setValue`
2. accumulator can't be serialized before registered.

Problems need to be addressed in follow-ups:

1. with this new API, `AccumulatorInfo` doesn't make a lot of sense, the partial output is not partial updates, we need to expose the intermediate value.
2. `ExceptionFailure` should not carry the accumulator updates. Why do users care about accumulator updates for failed cases? It looks like we only use this feature to update the internal metrics, how about we sending a heartbeat to update internal metrics after the failure event?
3. the public event `SparkListenerTaskEnd` carries a `TaskMetrics`. Ideally this `TaskMetrics` don't need to carry external accumulators, as the only method of `TaskMetrics` that can access external accumulators is `private[spark]`. However, `SQLListener` use it to retrieve sql metrics.

## How was this patch tested?

existing tests

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12612 from cloud-fan/acc.
2016-04-28 00:26:39 -07:00
Davies Liu ae4e3def5e [SPARK-14961] Build HashedRelation larger than 1G
## What changes were proposed in this pull request?

Currently, LongToUnsafeRowMap use byte array as the underlying page, which can't be larger 1G.

This PR improves LongToUnsafeRowMap  to scale up to 8G bytes by using array of Long instead of array of byte.

## How was this patch tested?

Manually ran a test to confirm that both UnsafeHashedRelation and LongHashedRelation could build a map that larger than 2G.

Author: Davies Liu <davies@databricks.com>

Closes #12740 from davies/larger_broadcast.
2016-04-27 21:23:40 -07:00
hyukjinkwon f5da592fc6 [SPARK-12143][SQL] Binary type support for Hive thrift server
## What changes were proposed in this pull request?

https://issues.apache.org/jira/browse/SPARK-12143

This PR adds the support for conversion between `SparkRow` in Spark and `RowSet` in Hive for `BinaryType` as `Array[Byte]` (JDBC)
## How was this patch tested?

Unittests in `HiveThriftBinaryServerSuite` (regression test)

Closes #10139

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12733 from HyukjinKwon/SPARK-12143.
2016-04-27 17:41:05 -07:00
Andrew Or 37575115b9 [SPARK-14940][SQL] Move ExternalCatalog to own file
## What changes were proposed in this pull request?

`interfaces.scala` was getting big. This just moves the biggest class in there to a new file for cleanliness.

## How was this patch tested?

Just moving things around.

Author: Andrew Or <andrew@databricks.com>

Closes #12721 from andrewor14/move-external-catalog.
2016-04-27 14:17:36 -07:00
Cheng Lian 24bea00047 [SPARK-14954] [SQL] Add PARTITION BY and BUCKET BY clause for data source CTAS syntax
Currently, we can only create persisted partitioned and/or bucketed data source tables using the Dataset API but not using SQL DDL. This PR implements the following syntax to add partitioning and bucketing support to the SQL DDL:

```
CREATE TABLE <table-name>
USING <provider> [OPTIONS (<key1> <value1>, <key2> <value2>, ...)]
[PARTITIONED BY (col1, col2, ...)]
[CLUSTERED BY (col1, col2, ...) [SORTED BY (col1, col2, ...)] INTO <n> BUCKETS]
AS SELECT ...
```

Test cases are added in `MetastoreDataSourcesSuite` to check the newly added syntax.

Author: Cheng Lian <lian@databricks.com>
Author: Yin Huai <yhuai@databricks.com>

Closes #12734 from liancheng/spark-14954.
2016-04-27 13:55:13 -07:00
Dongjoon Hyun af92299fdb [SPARK-14664][SQL] Implement DecimalAggregates optimization for Window queries
## What changes were proposed in this pull request?

This PR aims to implement decimal aggregation optimization for window queries by improving existing `DecimalAggregates`. Historically, `DecimalAggregates` optimizer is designed to transform general `sum/avg(decimal)`, but it breaks recently added windows queries like the followings. The following queries work well without the current `DecimalAggregates` optimizer.

**Sum**
```scala
scala> sql("select sum(a) over () from (select explode(array(1.0,2.0)) a) t").head
java.lang.RuntimeException: Unsupported window function: MakeDecimal((sum(UnscaledValue(a#31)),mode=Complete,isDistinct=false),12,1)
scala> sql("select sum(a) over () from (select explode(array(1.0,2.0)) a) t").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [sum(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#23]
:     +- INPUT
+- Window [MakeDecimal((sum(UnscaledValue(a#21)),mode=Complete,isDistinct=false),12,1) windowspecdefinition(ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING) AS sum(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#23]
   +- Exchange SinglePartition, None
      +- Generate explode([1.0,2.0]), false, false, [a#21]
         +- Scan OneRowRelation[]
```

**Average**
```scala
scala> sql("select avg(a) over () from (select explode(array(1.0,2.0)) a) t").head
java.lang.RuntimeException: Unsupported window function: cast(((avg(UnscaledValue(a#40)),mode=Complete,isDistinct=false) / 10.0) as decimal(6,5))
scala> sql("select avg(a) over () from (select explode(array(1.0,2.0)) a) t").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [avg(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#44]
:     +- INPUT
+- Window [cast(((avg(UnscaledValue(a#42)),mode=Complete,isDistinct=false) / 10.0) as decimal(6,5)) windowspecdefinition(ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING) AS avg(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#44]
   +- Exchange SinglePartition, None
      +- Generate explode([1.0,2.0]), false, false, [a#42]
         +- Scan OneRowRelation[]
```

After this PR, those queries work fine and new optimized physical plans look like the followings.

**Sum**
```scala
scala> sql("select sum(a) over () from (select explode(array(1.0,2.0)) a) t").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [sum(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#35]
:     +- INPUT
+- Window [MakeDecimal((sum(UnscaledValue(a#33)),mode=Complete,isDistinct=false) windowspecdefinition(ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING),12,1) AS sum(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#35]
   +- Exchange SinglePartition, None
      +- Generate explode([1.0,2.0]), false, false, [a#33]
         +- Scan OneRowRelation[]
```

**Average**
```scala
scala> sql("select avg(a) over () from (select explode(array(1.0,2.0)) a) t").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [avg(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#47]
:     +- INPUT
+- Window [cast(((avg(UnscaledValue(a#45)),mode=Complete,isDistinct=false) windowspecdefinition(ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING) / 10.0) as decimal(6,5)) AS avg(a) OVER (  ROWS BETWEEN UNBOUNDED PRECEDING AND UNBOUNDED FOLLOWING)#47]
   +- Exchange SinglePartition, None
      +- Generate explode([1.0,2.0]), false, false, [a#45]
         +- Scan OneRowRelation[]
```

In this PR, *SUM over window* pattern matching is based on the code of hvanhovell ; he should be credited for the work he did.

## How was this patch tested?

Pass the Jenkins tests (with newly added testcases)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12421 from dongjoon-hyun/SPARK-14664.
2016-04-27 21:36:19 +02:00
Liwei Lin a234cc6146 [SPARK-14874][SQL][STREAMING] Remove the obsolete Batch representation
## What changes were proposed in this pull request?

The `Batch` class, which had been used to indicate progress in a stream, was abandoned by [[SPARK-13985][SQL] Deterministic batches with ids](caea152145) and then became useless.

This patch:
- removes the `Batch` class
- ~~does some related renaming~~ (update: this has been reverted)
- fixes some related comments

## How was this patch tested?

N/A

Author: Liwei Lin <lwlin7@gmail.com>

Closes #12638 from lw-lin/remove-batch.
2016-04-27 10:25:33 -07:00
Herman van Hovell 7dd01d9c01 [SPARK-14950][SQL] Fix BroadcastHashJoin's unique key Anti-Joins
### What changes were proposed in this pull request?
Anti-Joins using BroadcastHashJoin's unique key code path are broken; it currently returns Semi Join results . This PR fixes this bug.

### How was this patch tested?
Added tests cases to `ExistenceJoinSuite`.

cc davies gatorsmile

Author: Herman van Hovell <hvanhovell@questtec.nl>

Closes #12730 from hvanhovell/SPARK-14950.
2016-04-27 19:15:17 +02:00
Reynold Xin ea017b5574 [SPARK-14949][SQL] Remove HiveConf dependency from InsertIntoHiveTable
## What changes were proposed in this pull request?
This patch removes the use of HiveConf from InsertIntoHiveTable. I think this is the last major use of HiveConf and after this we can try to remove the execution HiveConf.

## How was this patch tested?
Internal refactoring and should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12728 from rxin/SPARK-14949.
2016-04-27 09:30:57 -07:00
Yin Huai 54a3eb8312 [SPARK-14130][SQL] Throw exceptions for ALTER TABLE ADD/REPLACE/CHANGE COLUMN, ALTER TABLE SET FILEFORMAT, DFS, and transaction related commands
## What changes were proposed in this pull request?
This PR will make Spark SQL not allow ALTER TABLE ADD/REPLACE/CHANGE COLUMN, ALTER TABLE SET FILEFORMAT, DFS, and transaction related commands.

## How was this patch tested?
Existing tests. For those tests that I put in the blacklist, I am adding the useful parts back to SQLQuerySuite.

Author: Yin Huai <yhuai@databricks.com>

Closes #12714 from yhuai/banNativeCommand.
2016-04-27 00:30:54 -07:00
Reynold Xin d73d67f623 [SPARK-14944][SPARK-14943][SQL] Remove HiveConf from HiveTableScanExec, HiveTableReader, and ScriptTransformation
## What changes were proposed in this pull request?
This patch removes HiveConf from HiveTableScanExec and HiveTableReader and instead just uses our own configuration system. I'm splitting the large change of removing HiveConf into multiple independent pull requests because it is very difficult to debug test failures when they are all combined in one giant one.

## How was this patch tested?
Should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12727 from rxin/SPARK-14944.
2016-04-26 23:42:42 -07:00
Reynold Xin 8fda5a73dc [SPARK-14913][SQL] Simplify configuration API
## What changes were proposed in this pull request?
We currently expose both Hadoop configuration and Spark SQL configuration in RuntimeConfig. I think we can remove the Hadoop configuration part, and simply generate Hadoop Configuration on the fly by passing all the SQL configurations into it. This way, there is a single interface (in Java/Scala/Python/SQL) for end-users.

As part of this patch, I also removed some config options deprecated in Spark 1.x.

## How was this patch tested?
Updated relevant tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12689 from rxin/SPARK-14913.
2016-04-26 22:02:28 -07:00
Andrew Or d8a83a564f [SPARK-13477][SQL] Expose new user-facing Catalog interface
## What changes were proposed in this pull request?

#12625 exposed a new user-facing conf interface in `SparkSession`. This patch adds a catalog interface.

## How was this patch tested?

See `CatalogSuite`.

Author: Andrew Or <andrew@databricks.com>

Closes #12713 from andrewor14/user-facing-catalog.
2016-04-26 21:29:25 -07:00
Dilip Biswal d93976d866 [SPARK-14445][SQL] Support native execution of SHOW COLUMNS and SHOW PARTITIONS
## What changes were proposed in this pull request?
This PR adds Native execution of SHOW COLUMNS and SHOW PARTITION commands.

Command Syntax:
``` SQL
SHOW COLUMNS (FROM | IN) table_identifier [(FROM | IN) database]
```
``` SQL
SHOW PARTITIONS [db_name.]table_name [PARTITION(partition_spec)]
```

## How was this patch tested?

Added test cases in HiveCommandSuite to verify execution and DDLCommandSuite
to verify plans.

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #12222 from dilipbiswal/dkb_show_columns.
2016-04-27 09:28:24 +08:00
Sameer Agarwal 9797cc20c0 [SPARK-14929] [SQL] Disable vectorized map for wide schemas & high-precision decimals
## What changes were proposed in this pull request?

While the vectorized hash map in `TungstenAggregate` is currently supported for all primitive data types during partial aggregation, this patch only enables the hash map for a subset of cases that've been verified to show performance improvements on our benchmarks subject to an internal conf that sets an upper limit on the maximum length of the aggregate key/value schema. This list of supported use-cases should be expanded over time.

## How was this patch tested?

This is no new change in functionality so existing tests should suffice. Performance tests were done on TPCDS benchmarks.

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12710 from sameeragarwal/vectorized-enable.
2016-04-26 14:51:14 -07:00
Davies Liu 7131b03bcf [SPARK-14853] [SQL] Support LeftSemi/LeftAnti in SortMergeJoinExec
## What changes were proposed in this pull request?

This PR update SortMergeJoinExec to support LeftSemi/LeftAnti, so it could support all the join types, same as other three join implementations: BroadcastHashJoinExec, ShuffledHashJoinExec,and BroadcastNestedLoopJoinExec.

This PR also simplify the join selection in SparkStrategy.

## How was this patch tested?

Added new tests.

Author: Davies Liu <davies@databricks.com>

Closes #12668 from davies/smj_semi.
2016-04-26 12:43:47 -07:00
Andrew Or 2a3d39f48b [MINOR] Follow-up to #12625
## What changes were proposed in this pull request?

That patch mistakenly widened the visibility from `private[x]` to `protected[x]`. This patch reverts those changes.

Author: Andrew Or <andrew@databricks.com>

Closes #12686 from andrewor14/visibility.
2016-04-26 11:08:08 -07:00
Reynold Xin 5cb03220a0 [SPARK-14912][SQL] Propagate data source options to Hadoop configuration
## What changes were proposed in this pull request?
We currently have no way for users to propagate options to the underlying library that rely in Hadoop configurations to work. For example, there are various options in parquet-mr that users might want to set, but the data source API does not expose a per-job way to set it. This patch propagates the user-specified options also into Hadoop Configuration.

## How was this patch tested?
Used a mock data source implementation to test both the read path and the write path.

Author: Reynold Xin <rxin@databricks.com>

Closes #12688 from rxin/SPARK-14912.
2016-04-26 10:58:56 -07:00
gatorsmile 162cf02efa [SPARK-14910][SQL] Native DDL Command Support for Describe Function in Non-identifier Format
#### What changes were proposed in this pull request?
The existing `Describe Function` only support the function name in `identifier`. This is different from what Hive behaves. That is why many test cases `udf_abc` in `HiveCompatibilitySuite` are not using our native DDL support. For example,
- udf_not.q
- udf_bitwise_not.q

This PR is to resolve the issues. Now, we can support the command of `Describe Function` whose function names are in the following format:
- `qualifiedName` (e.g., `db.func1`)
- `STRING` (e.g., `'func1'`)
- `comparisonOperator` (e.g,. `<`)
- `arithmeticOperator` (e.g., `+`)
- `predicateOperator` (e.g., `or`)

Note, before this PR, we only have a native command support when the function name is in the format of `qualifiedName`.
#### How was this patch tested?
Added test cases in `DDLSuite.scala`. Also manually verified all the related test cases in `HiveCompatibilitySuite` passed.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12679 from gatorsmile/descFunction.
2016-04-26 19:29:34 +02:00
Jacek Laskowski b208229ba1 [MINOR][DOCS] Minor typo fixes
## What changes were proposed in this pull request?

Minor typo fixes (too minor to deserve separate a JIRA)

## How was this patch tested?

local build

Author: Jacek Laskowski <jacek@japila.pl>

Closes #12469 from jaceklaskowski/minor-typo-fixes.
2016-04-26 11:51:12 +01:00
Azeem Jiva de6e633420 [SPARK-14756][CORE] Use parseLong instead of valueOf
## What changes were proposed in this pull request?

Use Long.parseLong which returns a primative.
Use a series of appends() reduces the creation of an extra StringBuilder type

## How was this patch tested?

Unit tests

Author: Azeem Jiva <azeemj@gmail.com>

Closes #12520 from javawithjiva/minor.
2016-04-26 11:49:04 +01:00
Reynold Xin f870921811 [HOTFIX] Fix the problem for real this time. 2016-04-25 21:38:01 -07:00
Reynold Xin d2614eaadb [HOTFIX] Fix compilation 2016-04-25 21:24:06 -07:00
Andrew Or 18c2c92580 [SPARK-14861][SQL] Replace internal usages of SQLContext with SparkSession
## What changes were proposed in this pull request?

In Spark 2.0, `SparkSession` is the new thing. Internally we should stop using `SQLContext` everywhere since that's supposed to be not the main user-facing API anymore.

In this patch I took care to not break any public APIs. The one place that's suspect is `o.a.s.ml.source.libsvm.DefaultSource`, but according to mengxr it's not supposed to be public so it's OK to change the underlying `FileFormat` trait.

**Reviewers**: This is a big patch that may be difficult to review but the changes are actually really straightforward. If you prefer I can break it up into a few smaller patches, but it will delay the progress of this issue a little.

## How was this patch tested?

No change in functionality intended.

Author: Andrew Or <andrew@databricks.com>

Closes #12625 from andrewor14/spark-session-refactor.
2016-04-25 20:54:31 -07:00
Andrew Or fa3c06987e [SPARK-14904][SQL] Put removed HiveContext in compatibility module
## What changes were proposed in this pull request?
This is for users who can't upgrade and need to continue to use HiveContext.

## How was this patch tested?
Added some basic tests for sanity check.

This is based on #12672 and closes #12672.

Author: Andrew Or <andrew@databricks.com>
Author: Reynold Xin <rxin@databricks.com>

Closes #12682 from rxin/add-back-hive-context.
2016-04-25 20:53:16 -07:00
Sameer Agarwal c71c6853fc [SPARK-14870][SQL][FOLLOW-UP] Move decimalDataWithNulls in DataFrameAggregateSuite
## What changes were proposed in this pull request?

Minor followup to https://github.com/apache/spark/pull/12651

## How was this patch tested?

Test-only change

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12674 from sameeragarwal/tpcds-fix-2.
2016-04-25 18:22:06 -07:00
Andrew Or cfa64882fc [SPARK-14902][SQL] Expose RuntimeConfig in SparkSession
## What changes were proposed in this pull request?

`RuntimeConfig` is the new user-facing API in 2.0 added in #11378. Until now, however, it's been dead code. This patch uses `RuntimeConfig` in `SessionState` and exposes that through the `SparkSession`.

## How was this patch tested?

New test in `SQLContextSuite`.

Author: Andrew Or <andrew@databricks.com>

Closes #12669 from andrewor14/use-runtime-conf.
2016-04-25 17:52:25 -07:00
Reynold Xin f36c9c8379 [SPARK-14888][SQL] UnresolvedFunction should use FunctionIdentifier
## What changes were proposed in this pull request?
This patch changes UnresolvedFunction and UnresolvedGenerator to use a FunctionIdentifier rather than just a String for function name. Also changed SessionCatalog to accept FunctionIdentifier in lookupFunction.

## How was this patch tested?
Updated related unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12659 from rxin/SPARK-14888.
2016-04-25 16:20:57 -07:00
Andrew Or 34336b6250 [SPARK-14828][SQL] Start SparkSession in REPL instead of SQLContext
## What changes were proposed in this pull request?

```
Spark context available as 'sc' (master = local[*], app id = local-1461283768192).
Spark session available as 'spark'.
Welcome to
      ____              __
     / __/__  ___ _____/ /__
    _\ \/ _ \/ _ `/ __/  '_/
   /___/ .__/\_,_/_/ /_/\_\   version 2.0.0-SNAPSHOT
      /_/

Using Scala version 2.11.8 (Java HotSpot(TM) 64-Bit Server VM, Java 1.7.0_51)
Type in expressions to have them evaluated.
Type :help for more information.

scala> sql("SHOW TABLES").collect()
16/04/21 17:09:39 WARN ObjectStore: Version information not found in metastore. hive.metastore.schema.verification is not enabled so recording the schema version 1.2.0
16/04/21 17:09:39 WARN ObjectStore: Failed to get database default, returning NoSuchObjectException
res0: Array[org.apache.spark.sql.Row] = Array([src,false])

scala> sql("SHOW TABLES").collect()
res1: Array[org.apache.spark.sql.Row] = Array([src,false])

scala> spark.createDataFrame(Seq((1, 1), (2, 2), (3, 3)))
res2: org.apache.spark.sql.DataFrame = [_1: int, _2: int]
```

Hive things are loaded lazily.

## How was this patch tested?

Manual.

Author: Andrew Or <andrew@databricks.com>

Closes #12589 from andrewor14/spark-session-repl.
2016-04-25 15:30:18 -07:00
gatorsmile 0c47e274ab [SPARK-13739][SQL] Push Predicate Through Window
#### What changes were proposed in this pull request?

For performance, predicates can be pushed through Window if and only if the following conditions are satisfied:
 1. All the expressions are part of window partitioning key. The expressions can be compound.
 2. Deterministic

#### How was this patch tested?

TODO:
- [X]  DSL needs to be modified for window
- [X] more tests will be added.

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #11635 from gatorsmile/pushPredicateThroughWindow.
2016-04-25 22:32:34 +02:00
Andrew Or 3c5e65c339 [SPARK-14721][SQL] Remove HiveContext (part 2)
## What changes were proposed in this pull request?

This removes the class `HiveContext` itself along with all code usages associated with it. The bulk of the work was already done in #12485. This is mainly just code cleanup and actually removing the class.

Note: A couple of things will break after this patch. These will be fixed separately.
- the python HiveContext
- all the documentation / comments referencing HiveContext
- there will be no more HiveContext in the REPL (fixed by #12589)

## How was this patch tested?

No change in functionality.

Author: Andrew Or <andrew@databricks.com>

Closes #12585 from andrewor14/delete-hive-context.
2016-04-25 13:23:05 -07:00
gatorsmile 88e54218d5 [SPARK-14892][SQL][TEST] Disable the HiveCompatibilitySuite test case for INPUTDRIVER and OUTPUTDRIVER.
#### What changes were proposed in this pull request?
Disable the test case involving INPUTDRIVER and OUTPUTDRIVER, which are not supported

#### How was this patch tested?
N/A

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12662 from gatorsmile/disableInOutDriver.
2016-04-25 12:04:16 -07:00
Cheng Lian e66afd5c66 [SPARK-14875][SQL] Makes OutputWriterFactory.newInstance public
## What changes were proposed in this pull request?

This method was accidentally made `private[sql]` in Spark 2.0. This PR makes it public again, since 3rd party data sources like spark-avro depend on it.

## How was this patch tested?

N/A

Author: Cheng Lian <lian@databricks.com>

Closes #12652 from liancheng/spark-14875.
2016-04-25 20:42:49 +08:00
Sameer Agarwal cbdcd4edab [SPARK-14870] [SQL] Fix NPE in TPCDS q14a
## What changes were proposed in this pull request?

This PR fixes a bug in `TungstenAggregate` that manifests while aggregating by keys over nullable `BigDecimal` columns. This causes a null pointer exception while executing TPCDS q14a.

## How was this patch tested?

1. Added regression test in `DataFrameAggregateSuite`.
2. Verified that TPCDS q14a works

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12651 from sameeragarwal/tpcds-fix.
2016-04-24 22:52:50 -07:00
Yin Huai 35319d3264 [SPARK-14885][SQL] When creating a CatalogColumn, we should use the catalogString of a DataType object.
## What changes were proposed in this pull request?

Right now, the data type field of a CatalogColumn is using the string representation. When we create this string from a DataType object, there are places where we use simpleString instead of catalogString. Although catalogString is the same as simpleString right now, it is still good to use catalogString. So, we will not silently introduce issues when we change the semantic of simpleString or the implementation of catalogString.

## How was this patch tested?
Existing tests.

Author: Yin Huai <yhuai@databricks.com>

Closes #12654 from yhuai/useCatalogString.
2016-04-24 20:48:01 -07:00
Dongjoon Hyun d34d650378 [SPARK-14868][BUILD] Enable NewLineAtEofChecker in checkstyle and fix lint-java errors
## What changes were proposed in this pull request?

Spark uses `NewLineAtEofChecker` rule in Scala by ScalaStyle. And, most Java code also comply with the rule. This PR aims to enforce the same rule `NewlineAtEndOfFile` by CheckStyle explicitly. Also, this fixes lint-java errors since SPARK-14465. The followings are the items.

- Adds a new line at the end of the files (19 files)
- Fixes 25 lint-java errors (12 RedundantModifier, 6 **ArrayTypeStyle**, 2 LineLength, 2 UnusedImports, 2 RegexpSingleline, 1 ModifierOrder)

## How was this patch tested?

After the Jenkins test succeeds, `dev/lint-java` should pass. (Currently, Jenkins dose not run lint-java.)
```bash
$ dev/lint-java
Using `mvn` from path: /usr/local/bin/mvn
Checkstyle checks passed.
```

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12632 from dongjoon-hyun/SPARK-14868.
2016-04-24 20:40:03 -07:00
Reynold Xin d0ca5797a8 [SPARK-14876][SQL] SparkSession should be case insensitive by default
## What changes were proposed in this pull request?
This patch changes SparkSession to be case insensitive by default, in order to match other database systems.

## How was this patch tested?
N/A - I'm sure some tests will fail and I will need to fix those.

Author: Reynold Xin <rxin@databricks.com>

Closes #12643 from rxin/SPARK-14876.
2016-04-24 19:38:21 -07:00
Reynold Xin 0c8e5332ff Disable flaky script transformation test 2016-04-24 12:54:56 -07:00
jliwork f0f1a8afde [SPARK-14548][SQL] Support not greater than and not less than operator in Spark SQL
!< means not less than which is equivalent to >=
!> means not greater than which is equivalent to <=

I'd to create a PR to support these two operators.

I've added new test cases in: DataFrameSuite, ExpressionParserSuite, JDBCSuite, PlanParserSuite, SQLQuerySuite

dilipbiswal viirya gatorsmile

Author: jliwork <jiali@us.ibm.com>

Closes #12316 from jliwork/SPARK-14548.
2016-04-24 11:22:06 -07:00
gatorsmile 337289d712 [SPARK-14691][SQL] Simplify and Unify Error Generation for Unsupported Alter Table DDL
#### What changes were proposed in this pull request?
So far, we are capturing each unsupported Alter Table in separate visit functions. They should be unified and issue the same ParseException instead.

This PR is to refactor the existing implementation and make error message consistent for Alter Table DDL.

#### How was this patch tested?
Updated the existing test cases and also added new test cases to ensure all the unsupported statements are covered.

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12459 from gatorsmile/cleanAlterTable.
2016-04-24 18:53:27 +02:00
Yin Huai 1672149c26 [SPARK-14879][SQL] Move CreateMetastoreDataSource and CreateMetastoreDataSourceAsSelect to sql/core
## What changes were proposed in this pull request?

CreateMetastoreDataSource and CreateMetastoreDataSourceAsSelect are not Hive-specific. So, this PR moves them from sql/hive to sql/core. Also, I am adding `Command` suffix to these two classes.

## How was this patch tested?
Existing tests.

Author: Yin Huai <yhuai@databricks.com>

Closes #12645 from yhuai/moveCreateDataSource.
2016-04-23 22:29:31 -07:00
Tathagata Das 2853859655 [SPARK-14833][SQL][STREAMING][TEST] Refactor StreamTests to test for source fault-tolerance correctly.
## What changes were proposed in this pull request?

Current StreamTest allows testing of a streaming Dataset generated explicitly wraps a source. This is different from the actual production code path where the source object is dynamically created through a DataSource object every time a query is started. So all the fault-tolerance testing in FileSourceSuite and FileSourceStressSuite is not really testing the actual code path as they are just reusing the FileStreamSource object.

This PR fixes StreamTest and the FileSource***Suite to test this correctly. Instead of maintaining a mapping of source --> expected offset in StreamTest (which requires reuse of source object), it now maintains a mapping of source index --> offset, so that it is independent of the source object.

Summary of changes
- StreamTest refactored to keep track of offset by source index instead of source
- AddData, AddTextData and AddParquetData updated to find the FileStreamSource object from an active query, so that it can work with sources generated when query is started.
- Refactored unit tests in FileSource***Suite to test using DataFrame/Dataset generated with public, rather than reusing the same FileStreamSource. This correctly tests fault tolerance.

The refactoring changed a lot of indents in FileSourceSuite, so its recommended to hide whitespace changes with this - https://github.com/apache/spark/pull/12592/files?w=1

## How was this patch tested?

Refactored unit tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12592 from tdas/SPARK-14833.
2016-04-23 21:53:05 -07:00
Liang-Chi Hsieh ba5e0b87a0 [SPARK-14838] [SQL] Set default size for ObjecType to avoid failure when estimating sizeInBytes in ObjectProducer
## What changes were proposed in this pull request?

We have logical plans that produce domain objects which are `ObjectType`. As we can't estimate the size of `ObjectType`, we throw an `UnsupportedOperationException` if trying to do that. We should set a default size for `ObjectType` to avoid this failure.

## How was this patch tested?

`DatasetSuite`.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12599 from viirya/skip-broadcast-objectproducer.
2016-04-23 21:15:31 -07:00
tedyu b45819ac43 [SPARK-14856] Correct message in assertion for 'returning batch for wide table'
## What changes were proposed in this pull request?

There was a typo in the message for second assertion in "returning batch for wide table" test

## How was this patch tested?

Existing tests.

Author: tedyu <yuzhihong@gmail.com>

Closes #12639 from tedyu/master.
2016-04-23 16:42:37 -07:00
Dongjoon Hyun bebb0240e6 [MINOR] [SQL] Fix error message string in nullSafeEvel of TernaryExpression
## What changes were proposed in this pull request?

TernaryExpressions should thows proper error message for itself.
```scala
   protected def nullSafeEval(input1: Any, input2: Any, input3: Any): Any =
-    sys.error(s"BinaryExpressions must override either eval or nullSafeEval")
+    sys.error(s"TernaryExpressions must override either eval or nullSafeEval")
```

## How was this patch tested?

Manual.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12642 from dongjoon-hyun/minor_fix_error_msg_in_ternaryexpression.
2016-04-23 16:39:35 -07:00
Reynold Xin 162e12b085 [SPARK-14877][SQL] Remove HiveMetastoreTypes class
## What changes were proposed in this pull request?
It is unnecessary as DataType.catalogString largely replaces the need for this class.

## How was this patch tested?
Mostly removing dead code and should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12644 from rxin/SPARK-14877.
2016-04-23 15:41:17 -07:00
Reynold Xin e3c1366bbc [SPARK-14865][SQL] Better error handling for view creation.
## What changes were proposed in this pull request?
This patch improves error handling in view creation. CreateViewCommand itself will analyze the view SQL query first, and if it cannot successfully analyze it, throw an AnalysisException.

In addition, I also added the following two conservative guards for easier identification of Spark bugs:

1. If there is a bug and the generated view SQL cannot be analyzed, throw an exception at runtime. Note that this is not an AnalysisException because it is not caused by the user and more likely indicate a bug in Spark.
2. SQLBuilder when it gets an unresolved plan, it will also show the plan in the error message.

I also took the chance to simplify the internal implementation of CreateViewCommand, and *removed* a fallback path that would've masked an exception from before.

## How was this patch tested?
1. Added a unit test for the user facing error handling.
2. Manually introduced some bugs in Spark to test the internal defensive error handling.
3. Also added a test case to test nested views (not super relevant).

Author: Reynold Xin <rxin@databricks.com>

Closes #12633 from rxin/SPARK-14865.
2016-04-23 13:19:57 -07:00
Reynold Xin 890abd1279 [SPARK-14869][SQL] Don't mask exceptions in ResolveRelations
## What changes were proposed in this pull request?
In order to support running SQL directly on files, we added some code in ResolveRelations to catch the exception thrown by catalog.lookupRelation and ignore it. This unfortunately masks all the exceptions. This patch changes the logic to simply test the table's existence.

## How was this patch tested?
I manually hacked some bugs into Spark and made sure the exceptions were being propagated up.

Author: Reynold Xin <rxin@databricks.com>

Closes #12634 from rxin/SPARK-14869.
2016-04-23 12:49:36 -07:00
Reynold Xin 5c8a0ec99b [SPARK-14872][SQL] Restructure command package
## What changes were proposed in this pull request?
This patch restructures sql.execution.command package to break the commands into multiple files, in some logical organization: databases, tables, views, functions.

I also renamed basicOperators.scala to basicLogicalOperators.scala and basicPhysicalOperators.scala.

## How was this patch tested?
N/A - all I did was moving code around.

Author: Reynold Xin <rxin@databricks.com>

Closes #12636 from rxin/SPARK-14872.
2016-04-23 12:44:00 -07:00
Reynold Xin fddd3aee0d [SPARK-14871][SQL] Disable StatsReportListener to declutter output
## What changes were proposed in this pull request?
Spark SQL inherited from Shark to use the StatsReportListener. Unfortunately this clutters the spark-sql CLI output and makes it very difficult to read the actual query results.

## How was this patch tested?
Built and tested in spark-sql CLI.

Author: Reynold Xin <rxin@databricks.com>

Closes #12635 from rxin/SPARK-14871.
2016-04-23 12:42:37 -07:00
Davies Liu ee6b209a9d [HOTFIX] disable generated aggregate map 2016-04-23 11:41:42 -07:00
Reynold Xin f0bba7447f Turn script transformation back on.
## What changes were proposed in this pull request?

(Please fill in changes proposed in this fix)

## How was this patch tested?

(Please explain how this patch was tested. E.g. unit tests, integration tests, manual tests)

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Reynold Xin <rxin@databricks.com>

Closes #12565 from rxin/test-flaky.
2016-04-23 11:11:48 -07:00
Zheng RuiFeng 86ca8fefc8 [MINOR][ML][MLLIB] Remove unused imports
## What changes were proposed in this pull request?
del unused imports in ML/MLLIB

## How was this patch tested?
unit tests

Author: Zheng RuiFeng <ruifengz@foxmail.com>

Closes #12497 from zhengruifeng/del_unused_imports.
2016-04-22 23:20:10 -07:00
Rajesh Balamohan e5226e3007 [SPARK-14551][SQL] Reduce number of NameNode calls in OrcRelation
## What changes were proposed in this pull request?
When FileSourceStrategy is used, record reader is created which incurs a NN call internally. Later in OrcRelation.unwrapOrcStructs, it ends ups reading the file information to get the ObjectInspector. This incurs additional NN call. It would be good to avoid this additional NN call (specifically for partitioned datasets).

Added OrcRecordReader which is very similar to OrcNewInputFormat.OrcRecordReader with an option of exposing the ObjectInspector. This eliminates the need to look up the file later for generating the object inspector. This would be specifically be useful for partitioned tables/datasets.

## How was this patch tested?
Ran tpc-ds queries manually and also verified by running org.apache.spark.sql.hive.orc.OrcSuite,org.apache.spark.sql.hive.orc.OrcQuerySuite,org.apache.spark.sql.hive.orc.OrcPartitionDiscoverySuite,OrcPartitionDiscoverySuite.OrcHadoopFsRelationSuite,org.apache.spark.sql.hive.execution.HiveCompatibilitySuite

…SourceStrategy mode

Author: Rajesh Balamohan <rbalamohan@apache.org>

Closes #12319 from rajeshbalamohan/SPARK-14551.
2016-04-22 22:51:40 -07:00
Reynold Xin 95faa731c1 [SPARK-14866][SQL] Break SQLQuerySuite out into smaller test suites
## What changes were proposed in this pull request?
This patch breaks SQLQuerySuite out into smaller test suites. It was a little bit too large for debugging.

## How was this patch tested?
This is a test only change.

Author: Reynold Xin <rxin@databricks.com>

Closes #12630 from rxin/SPARK-14866.
2016-04-22 22:50:32 -07:00
Josh Rosen bdde010edb [SPARK-14863][SQL] Cache TreeNode's hashCode by default
Caching TreeNode's `hashCode` can lead to orders-of-magnitude performance improvement in certain optimizer rules when operating on huge/complex schemas.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12626 from JoshRosen/cache-treenode-hashcode.
2016-04-23 13:42:44 +08:00
Davies Liu 39a77e1567 [SPARK-14856] [SQL] returning batch correctly
## What changes were proposed in this pull request?

Currently, the Parquet reader decide whether to return batch based on required schema or full schema, it's not consistent, this PR fix that.

## How was this patch tested?

Added regression tests.

Author: Davies Liu <davies@databricks.com>

Closes #12619 from davies/fix_return_batch.
2016-04-22 22:32:32 -07:00
Reynold Xin c06110187b [SPARK-14842][SQL] Implement view creation in sql/core
## What changes were proposed in this pull request?
This patch re-implements view creation command in sql/core, based on the pre-existing view creation command in the Hive module. This consolidates the view creation logical command and physical command into a single one, called CreateViewCommand.

## How was this patch tested?
All the code should've been tested by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12615 from rxin/SPARK-14842-2.
2016-04-22 20:30:51 -07:00
Yin Huai 7dde1da949 [SPARK-14807] Create a compatibility module
## What changes were proposed in this pull request?

This PR creates a compatibility module in sql (called `hive-1-x-compatibility`), which will host HiveContext in Spark 2.0 (moving HiveContext to here will be done separately). This module is not included in assembly because only users who still want to access HiveContext need it.

## How was this patch tested?
I manually tested `sbt/sbt -Phive package` and `mvn -Phive package -DskipTests`.

Author: Yin Huai <yhuai@databricks.com>

Closes #12580 from yhuai/compatibility.
2016-04-22 17:50:24 -07:00
Reynold Xin d7d0cad0ad [SPARK-14855][SQL] Add "Exec" suffix to physical operators
## What changes were proposed in this pull request?
This patch adds "Exec" suffix to all physical operators. Before this patch, Spark's physical operators and logical operators are named the same (e.g. Project could be logical.Project or execution.Project), which caused small issues in code review and bigger issues in code refactoring.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #12617 from rxin/exec-node.
2016-04-22 17:43:56 -07:00
Tathagata Das c431a76d06 [SPARK-14832][SQL][STREAMING] Refactor DataSource to ensure schema is inferred only once when creating a file stream
## What changes were proposed in this pull request?

When creating a file stream using sqlContext.write.stream(), existing files are scanned twice for finding the schema
- Once, when creating a DataSource + StreamingRelation in the DataFrameReader.stream()
- Again, when creating streaming Source from the DataSource, in DataSource.createSource()

Instead, the schema should be generated only once, at the time of creating the dataframe, and when the streaming source is created, it should just reuse that schema

The solution proposed in this PR is to add a lazy field in DataSource that caches the schema. Then streaming Source created by the DataSource can just reuse the schema.

## How was this patch tested?
Refactored unit tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12591 from tdas/SPARK-14832.
2016-04-22 17:17:37 -07:00
Davies Liu c25b97fcce [SPARK-14582][SQL] increase parallelism for small tables
## What changes were proposed in this pull request?

This PR try to increase the parallelism for small table (a few of big files) to reduce the query time, by decrease the maxSplitBytes, the goal is to have at least one task per CPU in the cluster, if the total size of all files is bigger than openCostInBytes * 2 * nCPU.

For example, a small/medium table could be used as dimension table in huge query, this will be useful to reduce the time waiting for broadcast.

## How was this patch tested?

Existing tests.

Author: Davies Liu <davies@databricks.com>

Closes #12344 from davies/more_partition.
2016-04-22 17:09:16 -07:00
Dongjoon Hyun 3647120a5a [SPARK-14796][SQL] Add spark.sql.optimizer.inSetConversionThreshold config option.
## What changes were proposed in this pull request?

Currently, `OptimizeIn` optimizer replaces `In` expression into `InSet` expression if the size of set is greater than a constant, 10.
This issue aims to make a configuration `spark.sql.optimizer.inSetConversionThreshold` for that.

After this PR, `OptimizerIn` is configurable.
```scala
scala> sql("select a in (1,2,3) from (select explode(array(1,2)) a) T").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [a#7 IN (1,2,3) AS (a IN (1, 2, 3))#8]
:     +- INPUT
+- Generate explode([1,2]), false, false, [a#7]
   +- Scan OneRowRelation[]

scala> sqlContext.setConf("spark.sql.optimizer.inSetConversionThreshold", "2")

scala> sql("select a in (1,2,3) from (select explode(array(1,2)) a) T").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Project [a#16 INSET (1,2,3) AS (a IN (1, 2, 3))#17]
:     +- INPUT
+- Generate explode([1,2]), false, false, [a#16]
   +- Scan OneRowRelation[]
```

## How was this patch tested?

Pass the Jenkins tests (with a new testcase)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12562 from dongjoon-hyun/SPARK-14796.
2016-04-22 14:14:47 -07:00
Davies Liu 0dcf9dbebb [SPARK-14669] [SQL] Fix some SQL metrics in codegen and added more
## What changes were proposed in this pull request?

1. Fix the "spill size" of TungstenAggregate and Sort
2. Rename "data size" to "peak memory" to match the actual meaning (also consistent with task metrics)
3. Added "data size" for ShuffleExchange and BroadcastExchange
4. Added some timing for Sort, Aggregate and BroadcastExchange (this requires another patch to work)

## How was this patch tested?

Existing tests.
![metrics](https://cloud.githubusercontent.com/assets/40902/14573908/21ad2f00-030d-11e6-9e2c-c544f30039ea.png)

Author: Davies Liu <davies@databricks.com>

Closes #12425 from davies/fix_metrics.
2016-04-22 12:59:32 -07:00
Davies Liu 0419d63169 [SPARK-14791] [SQL] fix risk condition between broadcast and subquery
## What changes were proposed in this pull request?

SparkPlan.prepare() could be called in different threads (BroadcastExchange will call it in a thread pool), it only make sure that doPrepare() will only be called once, the second call to prepare() may return earlier before all the children had finished prepare(). Then some operator may call doProduce() before prepareSubqueries(), `null` will be used as the result of subquery, which is wrong. This cause TPCDS Q23B returns wrong answer sometimes.

This PR added synchronization for prepare(), make sure all the children had finished prepare() before return. Also call prepare() in produce() (similar to execute()).

Added checking for ScalarSubquery to make sure that the subquery has finished before using the result.

## How was this patch tested?

Manually tested with Q23B, no wrong answer anymore.

Author: Davies Liu <davies@databricks.com>

Closes #12600 from davies/fix_risk.
2016-04-22 12:29:53 -07:00
Davies Liu c417cec067 [SPARK-14763][SQL] fix subquery resolution
## What changes were proposed in this pull request?

Currently, a column could be resolved wrongly if there are columns from both outer table and subquery have the same name, we should only resolve the attributes that can't be resolved within subquery. They may have same exprId than other attributes in subquery, so we should create alias for them.

Also, the column in IN subquery could have same exprId, we should create alias for them.

## How was this patch tested?

Added regression tests. Manually tests TPCDS Q70 and Q95, work well after this patch.

Author: Davies Liu <davies@databricks.com>

Closes #12539 from davies/fix_subquery.
2016-04-22 20:55:41 +02:00
Herman van Hovell d060da098a [SPARK-14762] [SQL] TPCDS Q90 fails to parse
### What changes were proposed in this pull request?
TPCDS Q90 fails to parse because it uses a reserved keyword as an Identifier; `AT` was used as an alias for one of the subqueries. `AT` is not a reserved keyword and should have been registerd as a in the `nonReserved` rule.

In order to prevent this from happening again I have added tests for all keywords that are non-reserved in Hive. See the `nonReserved`, `sql11ReservedKeywordsUsedAsCastFunctionName` & `sql11ReservedKeywordsUsedAsIdentifier` rules in https://github.com/apache/hive/blob/master/ql/src/java/org/apache/hadoop/hive/ql/parse/IdentifiersParser.g.

### How was this patch tested?

Added tests to for all Hive non reserved keywords to `TableIdentifierParserSuite`.

cc davies

Author: Herman van Hovell <hvanhovell@questtec.nl>

Closes #12537 from hvanhovell/SPARK-14762.
2016-04-22 11:28:46 -07:00
Reynold Xin aeb52bea56 [SPARK-14841][SQL] Move SQLBuilder into sql/core
## What changes were proposed in this pull request?
This patch moves SQLBuilder into sql/core so we can in the future move view generation also into sql/core.

## How was this patch tested?
Also moved unit tests.

Author: Reynold Xin <rxin@databricks.com>
Author: Wenchen Fan <wenchen@databricks.com>

Closes #12602 from rxin/SPARK-14841.
2016-04-22 11:10:31 -07:00
Liang-Chi Hsieh 056883e070 [SPARK-13266] [SQL] None read/writer options were not transalated to "null"
## What changes were proposed in this pull request?

In Python, the `option` and `options` method of `DataFrameReader` and `DataFrameWriter` were sending the string "None" instead of `null` when passed `None`, therefore making it impossible to send an actual `null`. This fixes that problem.

This is based on #11305 from mathieulongtin.

## How was this patch tested?

Added test to readwriter.py.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>
Author: mathieu longtin <mathieu.longtin@nuance.com>

Closes #12494 from viirya/py-df-none-option.
2016-04-22 09:19:36 -07:00
Pete Robbins 5bed13a872 [SPARK-14848][SQL] Compare as Set in DatasetSuite - Java encoder
## What changes were proposed in this pull request?
Change test to compare sets rather than sequence

## How was this patch tested?
Full test runs on little endian and big endian platforms

Author: Pete Robbins <robbinspg@gmail.com>

Closes #12610 from robbinspg/DatasetSuiteFix.
2016-04-22 23:07:12 +08:00
Joan bf95b8da27 [SPARK-6429] Implement hashCode and equals together
## What changes were proposed in this pull request?

Implement some `hashCode` and `equals` together in order to enable the scalastyle.
This is a first batch, I will continue to implement them but I wanted to know your thoughts.

Author: Joan <joan@goyeau.com>

Closes #12157 from joan38/SPARK-6429-HashCode-Equals.
2016-04-22 12:24:12 +01:00
Liang-Chi Hsieh e09ab5da8b [SPARK-14609][SQL] Native support for LOAD DATA DDL command
## What changes were proposed in this pull request?

Add the native support for LOAD DATA DDL command that loads data into Hive table/partition.

## How was this patch tested?

`HiveDDLCommandSuite` and `HiveQuerySuite`. Besides, few Hive tests (`WindowQuerySuite`, `HiveTableScanSuite` and `HiveSerDeSuite`) also use `LOAD DATA` command.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12412 from viirya/ddl-load-data.
2016-04-22 18:26:28 +08:00
Reynold Xin 284b15d2fb [SPARK-14826][SQL] Remove HiveQueryExecution
## What changes were proposed in this pull request?
This patch removes HiveQueryExecution. As part of this, I consolidated all the describe commands into DescribeTableCommand.

## How was this patch tested?
Should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12588 from rxin/SPARK-14826.
2016-04-22 01:31:13 -07:00
Reynold Xin 3405cc7758 [SPARK-14835][SQL] Remove MetastoreRelation dependency from SQLBuilder
## What changes were proposed in this pull request?
This patch removes SQLBuilder's dependency on MetastoreRelation. We should be able to move SQLBuilder into the sql/core package after this change.

## How was this patch tested?
N/A - covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12594 from rxin/SPARK-14835.
2016-04-21 21:48:48 -07:00
Cheng Lian 145433f1aa [SPARK-14369] [SQL] Locality support for FileScanRDD
(This PR is a rebased version of PR #12153.)

## What changes were proposed in this pull request?

This PR adds preliminary locality support for `FileFormat` data sources by overriding `FileScanRDD.preferredLocations()`. The strategy can be divided into two parts:

1.  Block location lookup

    Unlike `HadoopRDD` or `NewHadoopRDD`, `FileScanRDD` doesn't have access to the underlying `InputFormat` or `InputSplit`, and thus can't rely on `InputSplit.getLocations()` to gather locality information. Instead, this PR queries block locations using `FileSystem.getBlockLocations()` after listing all `FileStatus`es in `HDFSFileCatalog` and convert all `FileStatus`es into `LocatedFileStatus`es.

    Note that although S3/S3A/S3N file systems don't provide valid locality information, their `getLocatedStatus()` implementations don't actually issue remote calls either. So there's no need to special case these file systems.

2.  Selecting preferred locations

    For each `FilePartition`, we pick up top 3 locations that containing the most data to be retrieved. This isn't necessarily the best algorithm out there. Further improvements may be brought up in follow-up PRs.

## How was this patch tested?

Tested by overriding default `FileSystem` implementation for `file:///` with a mocked one, which returns mocked block locations.

Author: Cheng Lian <lian@databricks.com>

Closes #12527 from liancheng/spark-14369-locality-rebased.
2016-04-21 21:48:09 -07:00
Sameer Agarwal b29bc3f515 [SPARK-14680] [SQL] Support all datatypes to use VectorizedHashmap in TungstenAggregate
## What changes were proposed in this pull request?

This PR adds support for all primitive datatypes, decimal types and stringtypes in the VectorizedHashmap during aggregation.

## How was this patch tested?

Existing tests for group-by aggregates should already test for all these datatypes. Additionally, manually inspected the generated code for all supported datatypes (details below).

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12440 from sameeragarwal/all-datatypes.
2016-04-21 21:31:01 -07:00
Takuya UESHIN f1fdb23821 [SPARK-14793] [SQL] Code generation for large complex type exceeds JVM size limit.
## What changes were proposed in this pull request?

Code generation for complex type, `CreateArray`, `CreateMap`, `CreateStruct`, `CreateNamedStruct`, exceeds JVM size limit for large elements.

We should split generated code into multiple `apply` functions if the complex types have large elements,  like `UnsafeProjection` or others for large expressions.

## How was this patch tested?

I added some tests to check if the generated codes for the expressions exceed or not.

Author: Takuya UESHIN <ueshin@happy-camper.st>

Closes #12559 from ueshin/issues/SPARK-14793.
2016-04-21 21:17:56 -07:00
Andrew Or df1953f0df [SPARK-14824][SQL] Rename HiveContext object to HiveUtils
## What changes were proposed in this pull request?

Just a rename so we can get rid of `HiveContext.scala`. Note that this will conflict with #12585.

## How was this patch tested?

No change in functionality.

Author: Andrew Or <andrew@databricks.com>

Closes #12586 from andrewor14/rename-hc-object.
2016-04-21 17:57:59 -07:00
Reynold Xin f181aee07c [SPARK-14821][SQL] Implement AnalyzeTable in sql/core and remove HiveSqlAstBuilder
## What changes were proposed in this pull request?
This patch moves analyze table parsing into SparkSqlAstBuilder and removes HiveSqlAstBuilder.

In order to avoid extensive refactoring, I created a common trait for CatalogRelation and MetastoreRelation, and match on that. In the future we should probably just consolidate the two into a single thing so we don't need this common trait.

## How was this patch tested?
Updated unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12584 from rxin/SPARK-14821.
2016-04-21 17:41:29 -07:00
Eric Liang e2b5647ab9 [SPARK-14724] Use radix sort for shuffles and sort operator when possible
## What changes were proposed in this pull request?

Spark currently uses TimSort for all in-memory sorts, including sorts done for shuffle. One low-hanging fruit is to use radix sort when possible (e.g. sorting by integer keys). This PR adds a radix sort implementation to the unsafe sort package and switches shuffles and sorts to use it when possible.

The current implementation does not have special support for null values, so we cannot radix-sort `LongType`. I will address this in a follow-up PR.

## How was this patch tested?

Unit tests, enabling radix sort on existing tests. Microbenchmark results:

```
Running benchmark: radix sort 25000000
Java HotSpot(TM) 64-Bit Server VM 1.8.0_66-b17 on Linux 3.13.0-44-generic
Intel(R) Core(TM) i7-4600U CPU  2.10GHz

radix sort 25000000:                Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
-------------------------------------------------------------------------------------------
reference TimSort key prefix array     15546 / 15859          1.6         621.9       1.0X
reference Arrays.sort                    2416 / 2446         10.3          96.6       6.4X
radix sort one byte                       133 /  137        188.4           5.3     117.2X
radix sort two bytes                      255 /  258         98.2          10.2      61.1X
radix sort eight bytes                    991 /  997         25.2          39.6      15.7X
radix sort key prefix array              1540 / 1563         16.2          61.6      10.1X
```

I also ran a mix of the supported TPCDS queries and compared TimSort vs RadixSort metrics. The overall benchmark ran ~10% faster with radix sort on. In the breakdown below, the radix-enabled sort phases averaged about 20x faster than TimSort, however sorting is only a small fraction of the overall runtime. About half of the TPCDS queries were able to take advantage of radix sort.

```
TPCDS on master: 2499s real time, 8185s executor
    - 1171s in TimSort, avg 267 MB/s
(note the /s accounting is weird here since dataSize counts the record sizes too)

TPCDS with radix enabled: 2294s real time, 7391s executor
    - 596s in TimSort, avg 254 MB/s
    - 26s in radix sort, avg 4.2 GB/s
```

cc davies rxin

Author: Eric Liang <ekl@databricks.com>

Closes #12490 from ericl/sort-benchmark.
2016-04-21 16:48:51 -07:00
Sameer Agarwal f82aa82480 [SPARK-14774][SQL] Write unscaled values in ColumnVector.putDecimal
## What changes were proposed in this pull request?

We recently made `ColumnarBatch.row` mutable and added a new `ColumnVector.putDecimal` method to support putting `Decimal` values in the `ColumnarBatch`. This unfortunately introduced a bug wherein we were not updating the vector with the proper unscaled values.

## How was this patch tested?

This codepath is hit only when the vectorized aggregate hashmap is enabled. https://github.com/apache/spark/pull/12440 makes sure that a number of regression tests/benchmarks test this bugfix.

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12541 from sameeragarwal/fix-bigdecimal.
2016-04-21 16:00:59 -07:00
Reynold Xin 1a95397bb6 [SPARK-14798][SQL] Move native command and script transformation parsing into SparkSqlAstBuilder
## What changes were proposed in this pull request?
This patch moves native command and script transformation into SparkSqlAstBuilder. This builds on #12561. See the last commit for diff.

## How was this patch tested?
Updated test cases to reflect this.

Author: Reynold Xin <rxin@databricks.com>

Closes #12564 from rxin/SPARK-14798.
2016-04-21 15:59:37 -07:00
Andrew Or ef6be7bedd [MINOR] Comment whitespace changes in #12553 2016-04-21 14:52:42 -07:00
Andrew Or a2e8d4fddd [SPARK-13643][SQL] Implement SparkSession
## What changes were proposed in this pull request?

After removing most of `HiveContext` in 8fc267ab33 we can now move existing functionality in `SQLContext` to `SparkSession`. As of this PR `SQLContext` becomes a simple wrapper that has a `SparkSession` and delegates all functionality to it.

## How was this patch tested?

Jenkins.

Author: Andrew Or <andrew@databricks.com>

Closes #12553 from andrewor14/implement-spark-session.
2016-04-21 14:18:18 -07:00
Reynold Xin 8e1bb0456d [SPARK-14801][SQL] Move MetastoreRelation to its own file
## What changes were proposed in this pull request?
This class is currently in HiveMetastoreCatalog.scala, which is a large file that makes refactoring and searching of usage difficult. Moving it out so I can then do SPARK-14799 and make the review of that simpler.

## How was this patch tested?
N/A - this is a straightforward move and should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12567 from rxin/SPARK-14801.
2016-04-21 11:54:10 -07:00
Reynold Xin 3a21e8d5ed [SPARK-14795][SQL] Remove the use of Hive's variable substitution
## What changes were proposed in this pull request?
This patch builds on #12556 and completely removes the use of Hive's variable substitution.

## How was this patch tested?
Covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12561 from rxin/SPARK-14795.
2016-04-21 11:42:25 -07:00
Reynold Xin 79008e6cfd [SPARK-14799][SQL] Remove MetastoreRelation dependency from AnalyzeTable - part 1
## What changes were proposed in this pull request?
This patch isolates AnalyzeTable's dependency on MetastoreRelation into a single line. After this we can work on converging MetastoreRelation and CatalogTable.

## How was this patch tested?
Covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12566 from rxin/SPARK-14799.
2016-04-21 10:57:16 -07:00
Josh Rosen a70d40314c [SPARK-14783] Preserve full exception stacktrace in IsolatedClientLoader
In IsolatedClientLoader, we have a`catch` block which throws an exception without wrapping the original exception, causing the full exception stacktrace and any nested exceptions to be lost. This patch fixes this, improving the usefulness of classloading error messages.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12548 from JoshRosen/improve-logging-for-hive-classloader-issues.
2016-04-21 10:43:22 -07:00
Josh Rosen 649335d6c1 [SPARK-14797][BUILD] Spark SQL POM should not hardcode spark-sketch_2.11 dep.
Spark SQL's POM hardcodes a dependency on `spark-sketch_2.11`, which causes Scala 2.10 builds to include the `_2.11` dependency. This is harmless since `spark-sketch` is a pure-Java module (see #12334 for a discussion of dropping the Scala version suffixes from these modules' artifactIds), but it's confusing to people looking at the published POMs.

This patch fixes this by using `${scala.binary.version}` to substitute the correct suffix, and also adds a set of Maven Enforcer rules to ensure that `_2.11` artifacts are not used in 2.10 builds (and vice-versa).

/cc ahirreddy, who spotted this issue.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12563 from JoshRosen/fix-sketch-scala-version.
2016-04-21 09:57:26 -07:00
Liang-Chi Hsieh 4ac6e75cd6 [HOTFIX] Remove wrong DDL tests
## What changes were proposed in this pull request?

As we moved most parsing rules to `SparkSqlParser`, some tests expected to throw exception are not correct anymore.

## How was this patch tested?
`DDLCommandSuite`

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12572 from viirya/hotfix-ddl.
2016-04-21 13:18:39 +02:00
Wenchen Fan cb51680d22 [SPARK-14753][CORE] remove internal flag in Accumulable
## What changes were proposed in this pull request?

the `Accumulable.internal` flag is only used to avoid registering internal accumulators for 2 certain cases:

1. `TaskMetrics.createTempShuffleReadMetrics`: the accumulators in the temp shuffle read metrics should not be registered.
2. `TaskMetrics.fromAccumulatorUpdates`: the created task metrics is only used to post event, accumulators inside it should not be registered.

For 1, we can create a `TempShuffleReadMetrics` that don't create accumulators, just keep the data and merge it at last.
For 2, we can un-register these accumulators immediately.

TODO: remove `internal` flag in `AccumulableInfo` with followup PR

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12525 from cloud-fan/acc.
2016-04-21 01:06:22 -07:00
Reynold Xin 228128ce25 [SPARK-14794][SQL] Don't pass analyze command into Hive
## What changes were proposed in this pull request?
We shouldn't pass analyze command to Hive because some of those would require running MapReduce jobs. For now, let's just always run the no scan analyze.

## How was this patch tested?
Updated test case to reflect this change.

Author: Reynold Xin <rxin@databricks.com>

Closes #12558 from rxin/parser-analyze.
2016-04-21 00:31:06 -07:00
Reynold Xin 3b9fd51739 [HOTFIX] Disable flaky tests 2016-04-21 00:25:28 -07:00
Reynold Xin 77d847ddb2 [SPARK-14792][SQL] Move as many parsing rules as possible into SQL parser
## What changes were proposed in this pull request?
This patch moves as many parsing rules as possible into SQL parser. There are only three more left after this patch: (1) run native command, (2) analyze, and (3) script IO. These 3 will be dealt with in a follow-up PR.

## How was this patch tested?
No test change. This simply moves code around.

Author: Reynold Xin <rxin@databricks.com>

Closes #12556 from rxin/SPARK-14792.
2016-04-21 00:24:24 -07:00
Josh Rosen cfe472a34e [SPARK-14786] Remove hive-cli dependency from hive subproject
The `hive` subproject currently depends on `hive-cli` in order to perform a check to see whether a `SessionState` is an instance of `org.apache.hadoop.hive.cli.CliSessionState` (see #9589). The introduction of this `hive-cli` dependency has caused problems for users whose Hive metastore JAR classpaths don't include the `hive-cli` classes (such as in #11495).

This patch removes this dependency on `hive-cli` and replaces the `isInstanceOf` check by reflection. I added a Maven Enforcer rule to ban `hive-cli` from the `hive` subproject in order to make sure that this dependency is not accidentally reintroduced.

/cc rxin yhuai adrian-wang preecet

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12551 from JoshRosen/remove-hive-cli-dep-from-hive-subproject.
2016-04-20 22:50:27 -07:00
Reynold Xin 8045814114 [SPARK-14782][SPARK-14778][SQL] Remove HiveConf dependency from HiveSqlAstBuilder
## What changes were proposed in this pull request?
The patch removes HiveConf dependency from HiveSqlAstBuilder. This is required in order to merge HiveSqlParser and SparkSqlAstBuilder, which would require getting rid of the Hive specific dependencies in HiveSqlParser.

This patch also accomplishes [SPARK-14778] Remove HiveSessionState.substitutor.

## How was this patch tested?
This should be covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12550 from rxin/SPARK-14782.
2016-04-20 21:20:51 -07:00
Reynold Xin 24f338ba7b [SPARK-14775][SQL] Remove TestHiveSparkSession.rewritePaths
## What changes were proposed in this pull request?
The path rewrite in TestHiveSparkSession is pretty hacky. I think we can remove those complexity and just do a string replacement when we read the query files in. This would remove the overloading of runNativeSql in TestHive, which will simplify the removal of Hive specific variable substitution.

## How was this patch tested?
This is a small test refactoring to simplify test infrastructure.

Author: Reynold Xin <rxin@databricks.com>

Closes #12543 from rxin/SPARK-14775.
2016-04-20 17:56:31 -07:00
Reynold Xin 334c293ec0 [SPARK-14769][SQL] Create built-in functionality for variable substitution
## What changes were proposed in this pull request?
In order to fully merge the Hive parser and the SQL parser, we'd need to support variable substitution in Spark. The implementation of the substitute algorithm is mostly copied from Hive, but I simplified the overall structure quite a bit and added more comprehensive test coverage.

Note that this pull request does not yet use this functionality anywhere.

## How was this patch tested?
Added VariableSubstitutionSuite for unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12538 from rxin/SPARK-14769.
2016-04-20 16:32:38 -07:00
Reynold Xin b28fe448d9 [SPARK-14770][SQL] Remove unused queries in hive module test resources
## What changes were proposed in this pull request?
We currently have five folders in queries: clientcompare, clientnegative, clientpositive, negative, and positive. Only clientpositive is used. We can remove the rest.

## How was this patch tested?
N/A - removing unused test resources.

Author: Reynold Xin <rxin@databricks.com>

Closes #12540 from rxin/SPARK-14770.
2016-04-20 16:29:26 -07:00
Subhobrata Dey fd82681945 [SPARK-14749][SQL, TESTS] PlannerSuite failed when it run individually
## What changes were proposed in this pull request?

3 testcases namely,

```
"count is partially aggregated"
"count distinct is partially aggregated"
"mixed aggregates are partially aggregated"
```

were failing when running PlannerSuite individually.
The PR provides a fix for this.

## How was this patch tested?

unit tests

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Subhobrata Dey <sbcd90@gmail.com>

Closes #12532 from sbcd90/plannersuitetestsfix.
2016-04-20 14:26:07 -07:00
Shixiong Zhu 7bc948557b [SPARK-14678][SQL] Add a file sink log to support versioning and compaction
## What changes were proposed in this pull request?

This PR adds a special log for FileStreamSink for two purposes:

- Versioning. A future Spark version should be able to read the metadata of an old FileStreamSink.
- Compaction. As reading from many small files is usually pretty slow, we should compact small metadata files into big files.

FileStreamSinkLog has a new log format instead of Java serialization format. It will write one log file for each batch. The first line of the log file is the version number, and there are multiple JSON lines following. Each JSON line is a JSON format of FileLog.

FileStreamSinkLog will compact log files every "spark.sql.sink.file.log.compactLen" batches into a big file. When doing a compact, it will read all history logs and merge them with the new batch. During the compaction, it will also delete the files that are deleted (marked by FileLog.action). When the reader uses allLogs to list all files, this method only returns the visible files (drops the deleted files).

## How was this patch tested?

FileStreamSinkLogSuite

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12435 from zsxwing/sink-log.
2016-04-20 13:33:04 -07:00
Andrew Or 8fc267ab33 [SPARK-14720][SPARK-13643] Move Hive-specific methods into HiveSessionState and Create a SparkSession class
## What changes were proposed in this pull request?
This PR has two main changes.
1. Move Hive-specific methods from HiveContext to HiveSessionState, which help the work of removing HiveContext.
2. Create a SparkSession Class, which will later be the entry point of Spark SQL users.

## How was this patch tested?
Existing tests

This PR is trying to fix test failures of https://github.com/apache/spark/pull/12485.

Author: Andrew Or <andrew@databricks.com>
Author: Yin Huai <yhuai@databricks.com>

Closes #12522 from yhuai/spark-session.
2016-04-20 12:58:48 -07:00
Tathagata Das cb8ea9e1f3 [SPARK-14741][SQL] Fixed error in reading json file stream inside a partitioned directory
## What changes were proposed in this pull request?

Consider the following directory structure
dir/col=X/some-files
If we create a text format streaming dataframe on `dir/col=X/`  then it should not consider as partitioning in columns. Even though the streaming dataframe does not do so, the generated batch dataframes pick up col as a partitioning columns, causing mismatch streaming source schema and generated df schema. This leads to runtime failure:
```
18:55:11.262 ERROR org.apache.spark.sql.execution.streaming.StreamExecution: Query query-0 terminated with error
java.lang.AssertionError: assertion failed: Invalid batch: c#2 != c#7,type#8
```
The reason is that the partition inferring code has no idea of a base path, above which it should not search of partitions. This PR makes sure that the batch DF is generated with the basePath set as the original path on which the file stream source is defined.

## How was this patch tested?

New unit test

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12517 from tdas/SPARK-14741.
2016-04-20 12:22:51 -07:00
Burak Yavuz 80bf48f437 [SPARK-14555] First cut of Python API for Structured Streaming
## What changes were proposed in this pull request?

This patch provides a first cut of python APIs for structured streaming. This PR provides the new classes:
 - ContinuousQuery
 - Trigger
 - ProcessingTime
in pyspark under `pyspark.sql.streaming`.

In addition, it contains the new methods added under:
 -  `DataFrameWriter`
     a) `startStream`
     b) `trigger`
     c) `queryName`

 -  `DataFrameReader`
     a) `stream`

 - `DataFrame`
    a) `isStreaming`

This PR doesn't contain all methods exposed for `ContinuousQuery`, for example:
 - `exception`
 - `sourceStatuses`
 - `sinkStatus`

They may be added in a follow up.

This PR also contains some very minor doc fixes in the Scala side.

## How was this patch tested?

Python doc tests

TODO:
 - [ ] verify Python docs look good

Author: Burak Yavuz <brkyvz@gmail.com>
Author: Burak Yavuz <burak@databricks.com>

Closes #12320 from brkyvz/stream-python.
2016-04-20 10:32:01 -07:00
Liwei Lin 17db4bfeaa [SPARK-14687][CORE][SQL][MLLIB] Call path.getFileSystem(conf) instead of call FileSystem.get(conf)
## What changes were proposed in this pull request?

- replaced `FileSystem.get(conf)` calls with `path.getFileSystem(conf)`

## How was this patch tested?

N/A

Author: Liwei Lin <lwlin7@gmail.com>

Closes #12450 from lw-lin/fix-fs-get.
2016-04-20 11:28:51 +01:00
Wenchen Fan 7abe9a6578 [SPARK-9013][SQL] generate MutableProjection directly instead of return a function
`MutableProjection` is not thread-safe and we won't use it in multiple threads. I think the reason that we return `() => MutableProjection` is not about thread safety, but to save the costs of generating code when we need same but individual mutable projections.

However, I only found one place that use this [feature](https://github.com/apache/spark/blob/master/sql/core/src/main/scala/org/apache/spark/sql/execution/Window.scala#L122-L123), and comparing to the troubles it brings, I think we should generate `MutableProjection` directly instead of return a function.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #7373 from cloud-fan/project.
2016-04-20 00:44:02 -07:00
Dongjoon Hyun 6f1ec1f267 [MINOR] [SQL] Re-enable explode() and json_tuple() testcases in ExpressionToSQLSuite
## What changes were proposed in this pull request?

Since [SPARK-12719: SQL Generation supports for generators](https://issues.apache.org/jira/browse/SPARK-12719) was resolved, this PR enables the related testcases: `explode()` and `json_tuple()`.

## How was this patch tested?

Pass the Jenkins tests (with re-enabled test cases).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12329 from dongjoon-hyun/minor_enable_testcases.
2016-04-19 21:55:29 -07:00
Wenchen Fan 856bc465d5 [SPARK-14600] [SQL] Push predicates through Expand
## What changes were proposed in this pull request?

https://issues.apache.org/jira/browse/SPARK-14600

This PR makes `Expand.output` have different attributes from the grouping attributes produced by the underlying `Project`, as they have different meaning, so that we can safely push down filter through `Expand`

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12496 from cloud-fan/expand.
2016-04-19 21:53:19 -07:00
Wenchen Fan 85d759ca3a [SPARK-14704][CORE] create accumulators in TaskMetrics
## What changes were proposed in this pull request?

Before this PR, we create accumulators at driver side(and register them) and send them to executor side, then we create `TaskMetrics` with these accumulators at executor side.
After this PR, we will create `TaskMetrics` at driver side and send it to executor side, so that we can create accumulators inside `TaskMetrics` directly, which is cleaner.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12472 from cloud-fan/acc.
2016-04-19 21:20:24 -07:00
Luciano Resende 78b38109ed [SPARK-13419] [SQL] Update SubquerySuite to use checkAnswer for validation
## What changes were proposed in this pull request?

Change SubquerySuite to validate test results utilizing checkAnswer helper method

## How was this patch tested?

Existing tests

Author: Luciano Resende <lresende@apache.org>

Closes #12269 from lresende/SPARK-13419.
2016-04-19 21:02:10 -07:00
Joan 3ae25f244b [SPARK-13929] Use Scala reflection for UDTs
## What changes were proposed in this pull request?

Enable ScalaReflection and User Defined Types for plain Scala classes.

This involves the move of `schemaFor` from `ScalaReflection` trait (which is Runtime and Compile time (macros) reflection) to the `ScalaReflection` object (runtime reflection only) as I believe this code wouldn't work at compile time anyway as it manipulates `Class`'s that are not compiled yet.

## How was this patch tested?

Unit test

Author: Joan <joan@goyeau.com>

Closes #12149 from joan38/SPARK-13929-Scala-reflection.
2016-04-19 17:36:31 -07:00
Cheng Lian 10f273d8db [SPARK-14407][SQL] Hides HadoopFsRelation related data source API into execution/datasources package #12178
## What changes were proposed in this pull request?

This PR moves `HadoopFsRelation` related data source API into `execution/datasources` package.

Note that to avoid conflicts, this PR is based on #12153. Effective changes for this PR only consist of the last three commits. Will rebase after merging #12153.

## How was this patch tested?

Existing tests.

Author: Yin Huai <yhuai@databricks.com>
Author: Cheng Lian <lian@databricks.com>

Closes #12361 from liancheng/spark-14407-hide-hadoop-fs-relation.
2016-04-19 17:32:23 -07:00
Herman van Hovell da8859226e [SPARK-4226] [SQL] Support IN/EXISTS Subqueries
### What changes were proposed in this pull request?
This PR adds support for in/exists predicate subqueries to Spark. Predicate sub-queries are used as a filtering condition in a query (this is the only supported use case). A predicate sub-query comes in two forms:

- `[NOT] EXISTS(subquery)`
- `[NOT] IN (subquery)`

This PR is (loosely) based on the work of davies (https://github.com/apache/spark/pull/10706) and chenghao-intel (https://github.com/apache/spark/pull/9055). They should be credited for the work they did.

### How was this patch tested?
Modified parsing unit tests.
Added tests to `org.apache.spark.sql.SQLQuerySuite`

cc rxin, davies & chenghao-intel

Author: Herman van Hovell <hvanhovell@questtec.nl>

Closes #12306 from hvanhovell/SPARK-4226.
2016-04-19 15:16:02 -07:00
Wenchen Fan 5cb2e33609 [SPARK-14675][SQL] ClassFormatError when use Seq as Aggregator buffer type
## What changes were proposed in this pull request?

After https://github.com/apache/spark/pull/12067, we now use expressions to do the aggregation in `TypedAggregateExpression`. To implement buffer merge, we produce a new buffer deserializer expression by replacing `AttributeReference` with right-side buffer attribute, like other `DeclarativeAggregate`s do, and finally combine the left and right buffer deserializer with `Invoke`.

However, after https://github.com/apache/spark/pull/12338, we will add loop variable to class members when codegen `MapObjects`. If the `Aggregator` buffer type is `Seq`, which is implemented by `MapObjects` expression, we will add the same loop variable to class members twice(by left and right buffer deserializer), which cause the `ClassFormatError`.

This PR fixes this issue by calling `distinct` before declare the class menbers.

## How was this patch tested?

new regression test in `DatasetAggregatorSuite`

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12468 from cloud-fan/bug.
2016-04-19 10:51:58 -07:00
Josh Rosen 947b9020b0 [SPARK-14676] Wrap and re-throw Await.result exceptions in order to capture full stacktrace
When `Await.result` throws an exception which originated from a different thread, the resulting stacktrace doesn't include the path leading to the `Await.result` call itself, making it difficult to identify the impact of these exceptions. For example, I've seen cases where broadcast cleaning errors propagate to the main thread and crash it but the resulting stacktrace doesn't include any of the main thread's code, making it difficult to pinpoint which exception crashed that thread.

This patch addresses this issue by explicitly catching, wrapping, and re-throwing exceptions that are thrown by `Await.result`.

I tested this manually using 16b31c8251, a patch which reproduces an issue where an RPC exception which occurs while unpersisting RDDs manages to crash the main thread without any useful stacktrace, and verified that informative, full stacktraces were generated after applying the fix in this PR.

/cc rxin nongli yhuai anabranch

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12433 from JoshRosen/wrap-and-rethrow-await-exceptions.
2016-04-19 10:38:10 -07:00
gatorsmile d9620e769e [SPARK-12457] Fixed the Wrong Description and Missing Example in Collection Functions
#### What changes were proposed in this pull request?
https://github.com/apache/spark/pull/12185 contains the original PR I submitted in https://github.com/apache/spark/pull/10418

However, it misses one of the extended example, a wrong description and a few typos for collection functions. This PR is fix all these issues.

#### How was this patch tested?
The existing test cases already cover it.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12492 from gatorsmile/expressionUpdate.
2016-04-19 10:33:40 -07:00
Wenchen Fan 9ee95b6ecc [SPARK-14491] [SQL] refactor object operator framework to make it easy to eliminate serializations
## What changes were proposed in this pull request?

This PR tries to separate the serialization and deserialization logic from object operators, so that it's easier to eliminate unnecessary serializations in optimizer.

Typed aggregate related operators are special, they will deserialize the input row to multiple objects and it's difficult to simply use a deserializer operator to abstract it, so we still mix the deserialization logic there.

## How was this patch tested?

existing tests and new test in `EliminateSerializationSuite`

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12260 from cloud-fan/encoder.
2016-04-19 10:00:44 -07:00
Cheng Lian 5e360c93be [SPARK-13681][SPARK-14458][SPARK-14566][SQL] Add back once removed CommitFailureTestRelationSuite and SimpleTextHadoopFsRelationSuite
## What changes were proposed in this pull request?

These test suites were removed while refactoring `HadoopFsRelation` related API. This PR brings them back.

This PR also fixes two regressions:

- SPARK-14458, which causes runtime error when saving partitioned tables using `FileFormat` data sources that are not able to infer their own schemata. This bug wasn't detected by any built-in data sources because all of them happen to have schema inference feature.

- SPARK-14566, which happens to be covered by SPARK-14458 and causes wrong query result or runtime error when
  - appending a Dataset `ds` to a persisted partitioned data source relation `t`, and
  - partition columns in `ds` don't all appear after data columns

## How was this patch tested?

`CommitFailureTestRelationSuite` uses a testing relation that always fails when committing write tasks to test write job cleanup.

`SimpleTextHadoopFsRelationSuite` uses a testing relation to test general `HadoopFsRelation` and `FileFormat` interfaces.

The two regressions are both covered by existing test cases.

Author: Cheng Lian <lian@databricks.com>

Closes #12179 from liancheng/spark-13681-commit-failure-test.
2016-04-19 09:37:00 -07:00
Dongjoon Hyun 3d46d796a3 [SPARK-14577][SQL] Add spark.sql.codegen.maxCaseBranches config option
## What changes were proposed in this pull request?

We currently disable codegen for `CaseWhen` if the number of branches is greater than 20 (in CaseWhen.MAX_NUM_CASES_FOR_CODEGEN). It would be better if this value is a non-public config defined in SQLConf.

## How was this patch tested?

Pass the Jenkins tests (including a new testcase `Support spark.sql.codegen.maxCaseBranches option`)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12353 from dongjoon-hyun/SPARK-14577.
2016-04-19 21:38:15 +08:00
bomeng 74fe235ab5 [SPARK-14398][SQL] Audit non-reserved keyword list in ANTLR4 parser
## What changes were proposed in this pull request?

I have compared non-reserved list in Antlr3 and Antlr4 one by one as well as all the existing keywords defined in Antlr4, added the missing keywords to the non-reserved keywords list.  If we need to support more syntax, we can add more keywords by then.

Any recommendation for the above is welcome.

## How was this patch tested?

I manually checked the keywords one by one. Please let me know if there is a better way to test.

Another thought: I suggest to put all the keywords definition and non-reserved list in order, that will be much easier to check in the future.

Author: bomeng <bmeng@us.ibm.com>

Closes #12191 from bomeng/SPARK-14398.
2016-04-19 09:09:58 +02:00
Wenchen Fan d4b94ead92 [SPARK-14595][SQL] add input metrics for FileScanRDD
## What changes were proposed in this pull request?

This is roughly based on the input metrics logic in `SqlNewHadoopRDD`

## How was this patch tested?

Not sure how to write a test, I manually verified it in Spark UI.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12352 from cloud-fan/metrics.
2016-04-18 23:48:22 -07:00
Sameer Agarwal 6f88006895 [SPARK-14722][SQL] Rename upstreams() -> inputRDDs() in WholeStageCodegen
## What changes were proposed in this pull request?

Per rxin's suggestions, this patch renames `upstreams()` to `inputRDDs()` in `WholeStageCodegen` for better implied semantics

## How was this patch tested?

N/A

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12486 from sameeragarwal/codegen-cleanup.
2016-04-18 20:28:58 -07:00
Sameer Agarwal 4eae1dbd7c [SPARK-14718][SQL] Avoid mutating ExprCode in doGenCode
## What changes were proposed in this pull request?

The `doGenCode` method currently takes in an `ExprCode`, mutates it and returns the java code to evaluate the given expression. It should instead just return a new `ExprCode` to avoid passing around mutable objects during code generation.

## How was this patch tested?

Existing Tests

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12483 from sameeragarwal/new-exprcode-2.
2016-04-18 20:28:22 -07:00
Reynold Xin 5e92583d38 [SPARK-14667] Remove HashShuffleManager
## What changes were proposed in this pull request?
The sort shuffle manager has been the default since Spark 1.2. It is time to remove the old hash shuffle manager.

## How was this patch tested?
Removed some tests related to the old manager.

Author: Reynold Xin <rxin@databricks.com>

Closes #12423 from rxin/SPARK-14667.
2016-04-18 19:30:00 -07:00
Andrew Or f1a11976db [SPARK-14674][SQL] Move HiveContext.hiveconf to HiveSessionState
## What changes were proposed in this pull request?

This is just cleanup. This allows us to remove HiveContext later without inflating the diff too much. This PR fixes the conflicts of https://github.com/apache/spark/pull/12431. It also removes the `def hiveConf` from `HiveSqlParser`. So, we will pass the HiveConf associated with a session explicitly instead of relying on Hive's `SessionState` to pass `HiveConf`.

## How was this patch tested?
Existing tests.

Closes #12431

Author: Andrew Or <andrew@databricks.com>
Author: Yin Huai <yhuai@databricks.com>

Closes #12449 from yhuai/hiveconf.
2016-04-18 14:28:47 -07:00
Sameer Agarwal 8bd8121329 [SPARK-14710][SQL] Rename gen/genCode to genCode/doGenCode to better reflect the semantics
## What changes were proposed in this pull request?

Per rxin's suggestions, this patch renames `s/gen/genCode` and `s/genCode/doGenCode` to better reflect the semantics of these 2 function calls.

## How was this patch tested?

N/A (refactoring only)

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12475 from sameeragarwal/gencode.
2016-04-18 14:03:40 -07:00
hyukjinkwon 6fc1e72d9b [MINOR] Revert removing explicit typing (changed in some examples and StatFunctions)
## What changes were proposed in this pull request?

This PR reverts some changes in https://github.com/apache/spark/pull/12413. (please see the discussion in that PR).

from
```scala
    words.foreachRDD { (rdd, time) =>
    ...
```

to
```scala
    words.foreachRDD { (rdd: RDD[String], time: Time) =>
    ...
```

Also, this was discussed in dev-mailing list, [here](http://apache-spark-developers-list.1001551.n3.nabble.com/Question-about-Scala-style-explicit-typing-within-transformation-functions-and-anonymous-val-td17173.html)

## How was this patch tested?

This was tested with `sbt scalastyle`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12452 from HyukjinKwon/revert-explicit-typing.
2016-04-18 13:45:03 -07:00
Andrew Or 28ee15702d [SPARK-14647][SQL] Group SQLContext/HiveContext state into SharedState
## What changes were proposed in this pull request?

This patch adds a SharedState that groups state shared across multiple SQLContexts. This is analogous to the SessionState added in SPARK-13526 that groups session-specific state. This cleanup makes the constructors of the contexts simpler and ultimately allows us to remove HiveContext in the near future.

## How was this patch tested?
Existing tests.

Author: Yin Huai <yhuai@databricks.com>

Closes #12463 from yhuai/sharedState.
2016-04-18 13:15:23 -07:00
Reynold Xin e4ae974294 [HOTFIX] Fix Scala 2.10 compilation break. 2016-04-18 12:57:23 -07:00
Dongjoon Hyun d280d1da1a [SPARK-14580][SPARK-14655][SQL] Hive IfCoercion should preserve predicate.
## What changes were proposed in this pull request?

Currently, `HiveTypeCoercion.IfCoercion` removes all predicates whose return-type are null. However, some UDFs need evaluations because they are designed to throw exceptions. This PR fixes that to preserve the predicates. Also, `assert_true` is implemented as Spark SQL function.

**Before**
```
scala> sql("select if(assert_true(false),2,3)").head
res2: org.apache.spark.sql.Row = [3]
```

**After**
```
scala> sql("select if(assert_true(false),2,3)").head
... ASSERT_TRUE ...
```

**Hive**
```
hive> select if(assert_true(false),2,3);
OK
Failed with exception java.io.IOException:org.apache.hadoop.hive.ql.metadata.HiveException: ASSERT_TRUE(): assertion failed.
```

## How was this patch tested?

Pass the Jenkins tests (including a new testcase in `HivePlanTest`)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12340 from dongjoon-hyun/SPARK-14580.
2016-04-18 12:26:56 -07:00
Tathagata Das 775cf17eaa [SPARK-14473][SQL] Define analysis rules to catch operations not supported in streaming
## What changes were proposed in this pull request?

There are many operations that are currently not supported in the streaming execution. For example:
 - joining two streams
 - unioning a stream and a batch source
 - sorting
 - window functions (not time windows)
 - distinct aggregates

Furthermore, executing a query with a stream source as a batch query should also fail.

This patch add an additional step after analysis in the QueryExecution which will check that all the operations in the analyzed logical plan is supported or not.

## How was this patch tested?
unit tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12246 from tdas/SPARK-14473.
2016-04-18 11:09:33 -07:00
Dongjoon Hyun 432d1399cb [SPARK-14614] [SQL] Add bround function
## What changes were proposed in this pull request?

This PR aims to add `bound` function (aka Banker's round) by extending current `round` implementation. [Hive supports `bround` since 1.3.0.](https://cwiki.apache.org/confluence/display/Hive/LanguageManual+UDF)

**Hive (1.3 ~ 2.0)**
```
hive> select round(2.5), bround(2.5);
OK
3.0	2.0
```

**After this PR**
```scala
scala> sql("select round(2.5), bround(2.5)").head
res0: org.apache.spark.sql.Row = [3,2]
```

## How was this patch tested?

Pass the Jenkins tests (with extended tests).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12376 from dongjoon-hyun/SPARK-14614.
2016-04-18 10:44:51 -07:00
Reynold Xin 1a3966472c [SPARK-14696][SQL] Add implicit encoders for boxed primitive types
## What changes were proposed in this pull request?
We currently only have implicit encoders for scala primitive types. We should also add implicit encoders for boxed primitives. Otherwise, the following code would not have an encoder:

```scala
sqlContext.range(1000).map { i => i }
```

## How was this patch tested?
Added a unit test case for this.

Author: Reynold Xin <rxin@databricks.com>

Closes #12466 from rxin/SPARK-14696.
2016-04-18 17:03:15 +08:00
Wenchen Fan 2f1d0320c9 [SPARK-13363][SQL] support Aggregator in RelationalGroupedDataset
## What changes were proposed in this pull request?

set the input encoder for `TypedColumn` in `RelationalGroupedDataset.agg`.

## How was this patch tested?

new tests in `DatasetAggregatorSuite`

close https://github.com/apache/spark/pull/11269

This PR brings https://github.com/apache/spark/pull/12359 up to date and fix the compile.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12451 from cloud-fan/agg.
2016-04-18 14:27:26 +08:00
Andrew Or 7de06a646d Revert "[SPARK-14647][SQL] Group SQLContext/HiveContext state into SharedState"
This reverts commit 5cefecc95a.
2016-04-17 17:35:41 -07:00
Subhobrata Dey 699a4dfd89 [SPARK-14632] randomSplit method fails on dataframes with maps in schema
## What changes were proposed in this pull request?

The patch fixes the issue with the randomSplit method which is not able to split dataframes which has maps in schema. The bug was introduced in spark 1.6.1.

## How was this patch tested?

Tested with unit tests.

(If this patch involves UI changes, please attach a screenshot; otherwise, remove this)

Author: Subhobrata Dey <sbcd90@gmail.com>

Closes #12438 from sbcd90/randomSplitIssue.
2016-04-17 15:18:32 -07:00
Andrew Or 3394b12c37 [SPARK-14672][SQL] Move HiveContext analyze logic to AnalyzeTable
## What changes were proposed in this pull request?

Move the implementation of `hiveContext.analyze` to the command of `AnalyzeTable`.

## How was this patch tested?
Existing tests.

Closes #12429

Author: Yin Huai <yhuai@databricks.com>
Author: Andrew Or <andrew@databricks.com>

Closes #12448 from yhuai/analyzeTable.
2016-04-16 15:35:51 -07:00
Andrew Or 5cefecc95a [SPARK-14647][SQL] Group SQLContext/HiveContext state into SharedState
## What changes were proposed in this pull request?

This patch adds a SharedState that groups state shared across multiple SQLContexts. This is analogous to the SessionState added in SPARK-13526 that groups session-specific state. This cleanup makes the constructors of the contexts simpler and ultimately allows us to remove HiveContext in the near future.

## How was this patch tested?
Existing tests.

Closes #12405

Author: Andrew Or <andrew@databricks.com>
Author: Yin Huai <yhuai@databricks.com>

Closes #12447 from yhuai/sharedState.
2016-04-16 14:00:53 -07:00
Reynold Xin 7319fcc1cd [SPARK-14677][SQL] follow up: make max iter num config internal
## What changes were proposed in this pull request?
This is a follow-up to make the max iteration number an internal config.

## How was this patch tested?
N/A

Author: Reynold Xin <rxin@databricks.com>

Closes #12441 from rxin/maxIterConfInternal.
2016-04-16 11:39:47 -07:00
hyukjinkwon 9f678e9754 [MINOR] Remove inappropriate type notation and extra anonymous closure within functional transformations
## What changes were proposed in this pull request?

This PR removes

- Inappropriate type notations
    For example, from
    ```scala
    words.foreachRDD { (rdd: RDD[String], time: Time) =>
    ...
    ```
    to
    ```scala
    words.foreachRDD { (rdd, time) =>
    ...
    ```

- Extra anonymous closure within functional transformations.
    For example,
    ```scala
    .map(item => {
      ...
    })
    ```

    which can be just simply as below:

    ```scala
    .map { item =>
      ...
    }
    ```

and corrects some obvious style nits.

## How was this patch tested?

This was tested after adding rules in `scalastyle-config.xml`, which ended up with not finding all perfectly.

The rules applied were below:

- For the first correction,

```xml
<check customId="NoExtraClosure" level="error" class="org.scalastyle.file.RegexChecker" enabled="true">
    <parameters><parameter name="regex">(?m)\.[a-zA-Z_][a-zA-Z0-9]*\(\s*[^,]+s*=>\s*\{[^\}]+\}\s*\)</parameter></parameters>
</check>
```

```xml
<check customId="NoExtraClosure" level="error" class="org.scalastyle.file.RegexChecker" enabled="true">
    <parameters><parameter name="regex">\.[a-zA-Z_][a-zA-Z0-9]*\s*[\{|\(]([^\n>,]+=>)?\s*\{([^()]|(?R))*\}^[,]</parameter></parameters>
</check>
```

- For the second correction
```xml
<check customId="TypeNotation" level="error" class="org.scalastyle.file.RegexChecker" enabled="true">
    <parameters><parameter name="regex">\.[a-zA-Z_][a-zA-Z0-9]*\s*[\{|\(]\s*\([^):]*:R))*\}^[,]</parameter></parameters>
</check>
```

**Those rules were not added**

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12413 from HyukjinKwon/SPARK-style.
2016-04-16 14:56:23 +01:00
Reynold Xin 527c780bb0 Revert "[SPARK-13363][SQL] support Aggregator in RelationalGroupedDataset"
This reverts commit 12854464c4.
2016-04-16 01:05:26 -07:00
Wenchen Fan 12854464c4 [SPARK-13363][SQL] support Aggregator in RelationalGroupedDataset
## What changes were proposed in this pull request?

set the input encoder for `TypedColumn` in `RelationalGroupedDataset.agg`.

## How was this patch tested?

new tests in `DatasetAggregatorSuite`

close https://github.com/apache/spark/pull/11269

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12359 from cloud-fan/agg.
2016-04-16 00:31:51 -07:00
Reynold Xin f4be0946af [SPARK-14677][SQL] Make the max number of iterations configurable for Catalyst
## What changes were proposed in this pull request?
We currently hard code the max number of optimizer/analyzer iterations to 100. This patch makes it configurable. While I'm at it, I also added the SessionCatalog to the optimizer, so we can use information there in optimization.

## How was this patch tested?
Updated unit tests to reflect the change.

Author: Reynold Xin <rxin@databricks.com>

Closes #12434 from rxin/SPARK-14677.
2016-04-15 20:28:09 -07:00
Yin Huai b2dfa84959 [SPARK-14668][SQL] Move CurrentDatabase to Catalyst
## What changes were proposed in this pull request?

This PR moves `CurrentDatabase` from sql/hive package to sql/catalyst. It also adds the function description, which looks like the following.

```
scala> sqlContext.sql("describe function extended current_database").collect.foreach(println)
[Function: current_database]
[Class: org.apache.spark.sql.execution.command.CurrentDatabase]
[Usage: current_database() - Returns the current database.]
[Extended Usage:
> SELECT current_database()]
```

## How was this patch tested?
Existing tests

Author: Yin Huai <yhuai@databricks.com>

Closes #12424 from yhuai/SPARK-14668.
2016-04-15 17:48:41 -07:00
Sameer Agarwal 4df65184b6 [SPARK-14620][SQL] Use/benchmark a better hash in VectorizedHashMap
## What changes were proposed in this pull request?

This PR uses a better hashing algorithm while probing the AggregateHashMap:

```java
long h = 0
h = (h ^ (0x9e3779b9)) + key_1 + (h << 6) + (h >>> 2);
h = (h ^ (0x9e3779b9)) + key_2 + (h << 6) + (h >>> 2);
h = (h ^ (0x9e3779b9)) + key_3 + (h << 6) + (h >>> 2);
...
h = (h ^ (0x9e3779b9)) + key_n + (h << 6) + (h >>> 2);
return h
```

Depends on: https://github.com/apache/spark/pull/12345
## How was this patch tested?

    Java HotSpot(TM) 64-Bit Server VM 1.8.0_73-b02 on Mac OS X 10.11.4
    Intel(R) Core(TM) i7-4960HQ CPU  2.60GHz
    Aggregate w keys:                   Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
    -------------------------------------------------------------------------------------------
    codegen = F                              2417 / 2457          8.7         115.2       1.0X
    codegen = T hashmap = F                  1554 / 1581         13.5          74.1       1.6X
    codegen = T hashmap = T                   877 /  929         23.9          41.8       2.8X

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12379 from sameeragarwal/hash.
2016-04-15 15:55:31 -07:00
Wenchen Fan 297ba3f1b4 [SPARK-14275][SQL] Reimplement TypedAggregateExpression to DeclarativeAggregate
## What changes were proposed in this pull request?

`ExpressionEncoder` is just a container for serialization and deserialization expressions, we can use these expressions to build `TypedAggregateExpression` directly, so that it can fit in `DeclarativeAggregate`, which is more efficient.

One trick is, for each buffer serializer expression, it will reference to the result object of serialization and function call. To avoid re-calculating this result object, we can serialize the buffer object to a single struct field, so that we can use a special `Expression` to only evaluate result object once.

## How was this patch tested?

existing tests

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12067 from cloud-fan/typed_udaf.
2016-04-15 12:10:00 +08:00
Sameer Agarwal b5c60bcdca [SPARK-14447][SQL] Speed up TungstenAggregate w/ keys using VectorizedHashMap
## What changes were proposed in this pull request?

This patch speeds up group-by aggregates by around 3-5x by leveraging an in-memory `AggregateHashMap` (please see https://github.com/apache/spark/pull/12161), an append-only aggregate hash map that can act as a 'cache' for extremely fast key-value lookups while evaluating aggregates (and fall back to the `BytesToBytesMap` if a given key isn't found).

Architecturally, it is backed by a power-of-2-sized array for index lookups and a columnar batch that stores the key-value pairs. The index lookups in the array rely on linear probing (with a small number of maximum tries) and use an inexpensive hash function which makes it really efficient for a majority of lookups. However, using linear probing and an inexpensive hash function also makes it less robust as compared to the `BytesToBytesMap` (especially for a large number of keys or even for certain distribution of keys) and requires us to fall back on the latter for correctness.

## How was this patch tested?

    Java HotSpot(TM) 64-Bit Server VM 1.8.0_73-b02 on Mac OS X 10.11.4
    Intel(R) Core(TM) i7-4960HQ CPU  2.60GHz
    Aggregate w keys:                   Best/Avg Time(ms)    Rate(M/s)   Per Row(ns)   Relative
    -------------------------------------------------------------------------------------------
    codegen = F                              2124 / 2204          9.9         101.3       1.0X
    codegen = T hashmap = F                  1198 / 1364         17.5          57.1       1.8X
    codegen = T hashmap = T                   369 /  600         56.8          17.6       5.8X

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12345 from sameeragarwal/tungsten-aggregate-integration.
2016-04-14 20:57:03 -07:00
Mark Grover ff9ae61a3b [SPARK-14601][DOC] Minor doc/usage changes related to removal of Spark assembly
## What changes were proposed in this pull request?

Removing references to assembly jar in documentation.
Adding an additional (previously undocumented) usage of spark-submit to run examples.

## How was this patch tested?

Ran spark-submit usage to ensure formatting was fine. Ran examples using SparkSubmit.

Author: Mark Grover <mark@apache.org>

Closes #12365 from markgrover/spark-14601.
2016-04-14 18:51:43 -07:00
Dongjoon Hyun d7e124edfe [SPARK-14545][SQL] Improve LikeSimplification by adding a%b rule
## What changes were proposed in this pull request?

Current `LikeSimplification` handles the following four rules.
- 'a%' => expr.StartsWith("a")
- '%b' => expr.EndsWith("b")
- '%a%' => expr.Contains("a")
- 'a' => EqualTo("a")

This PR adds the following rule.
- 'a%b' => expr.Length() >= 2 && expr.StartsWith("a") && expr.EndsWith("b")

Here, 2 is statically calculated from "a".size + "b".size.

**Before**
```
scala> sql("select a from (select explode(array('abc','adc')) a) T where a like 'a%c'").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Filter a#5 LIKE a%c
:     +- INPUT
+- Generate explode([abc,adc]), false, false, [a#5]
   +- Scan OneRowRelation[]
```

**After**
```
scala> sql("select a from (select explode(array('abc','adc')) a) T where a like 'a%c'").explain()
== Physical Plan ==
WholeStageCodegen
:  +- Filter ((length(a#5) >= 2) && (StartsWith(a#5, a) && EndsWith(a#5, c)))
:     +- INPUT
+- Generate explode([abc,adc]), false, false, [a#5]
   +- Scan OneRowRelation[]
```

## How was this patch tested?

Pass the Jenkins tests (including new testcase).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12312 from dongjoon-hyun/SPARK-14545.
2016-04-14 13:34:29 -07:00
Liang-Chi Hsieh 28efdd3fd7 [SPARK-14592][SQL] Native support for CREATE TABLE LIKE DDL command
## What changes were proposed in this pull request?
JIRA: https://issues.apache.org/jira/browse/SPARK-14592

This patch adds native support for DDL command `CREATE TABLE LIKE`.

The SQL syntax is like:

    CREATE TABLE table_name LIKE existing_table
    CREATE TABLE IF NOT EXISTS table_name LIKE existing_table

## How was this patch tested?
`HiveDDLCommandSuite`. `HiveQuerySuite` already tests `CREATE TABLE LIKE`.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

This patch had conflicts when merged, resolved by
Committer: Andrew Or <andrew@databricks.com>

Closes #12362 from viirya/create-table-like.
2016-04-14 11:08:08 -07:00
gatorsmile c971aee40d [SPARK-14499][SQL][TEST] Drop Partition Does Not Delete Data of External Tables
#### What changes were proposed in this pull request?
This PR is to add a test to ensure drop partitions of an external table will not delete data.

cc yhuai andrewor14

#### How was this patch tested?
N/A

Author: gatorsmile <gatorsmile@gmail.com>

This patch had conflicts when merged, resolved by
Committer: Andrew Or <andrew@databricks.com>

Closes #12350 from gatorsmile/testDropPartition.
2016-04-14 11:03:19 -07:00
Reynold Xin dac40b68dc [SPARK-14619] Track internal accumulators (metrics) by stage attempt
## What changes were proposed in this pull request?
When there are multiple attempts for a stage, we currently only reset internal accumulator values if all the tasks are resubmitted. It would make more sense to reset the accumulator values for each stage attempt. This will allow us to eventually get rid of the internal flag in the Accumulator class. This is part of my bigger effort to simplify accumulators and task metrics.

## How was this patch tested?
Covered by existing tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12378 from rxin/SPARK-14619.
2016-04-14 10:54:57 -07:00
Liwei Lin 3e27940a19 [SPARK-14630][BUILD][CORE][SQL][STREAMING] Code style: public abstract methods should have explicit return types
## What changes were proposed in this pull request?

Currently many public abstract methods (in abstract classes as well as traits) don't declare return types explicitly, such as in [o.a.s.streaming.dstream.InputDStream](https://github.com/apache/spark/blob/master/streaming/src/main/scala/org/apache/spark/streaming/dstream/InputDStream.scala#L110):
```scala
def start() // should be: def start(): Unit
def stop()  // should be: def stop(): Unit
```

These methods exist in core, sql, streaming; this PR fixes them.

## How was this patch tested?

N/A

## Which piece of scala style rule led to the changes?

the rule was added separately in https://github.com/apache/spark/pull/12396

Author: Liwei Lin <lwlin7@gmail.com>

Closes #12389 from lw-lin/public-abstract-methods.
2016-04-14 10:14:38 -07:00
gatorsmile 0d22092cd9 [SPARK-14125][SQL] Native DDL Support: Alter View
#### What changes were proposed in this pull request?
This PR is to provide a native DDL support for the following three Alter View commands:

Based on the Hive DDL document:
https://cwiki.apache.org/confluence/display/Hive/LanguageManual+DDL
##### 1. ALTER VIEW RENAME
**Syntax:**
```SQL
ALTER VIEW view_name RENAME TO new_view_name
```
- to change the name of a view to a different name
- not allowed to rename a view's name by ALTER TABLE

##### 2. ALTER VIEW SET TBLPROPERTIES
**Syntax:**
```SQL
ALTER VIEW view_name SET TBLPROPERTIES ('comment' = new_comment);
```
- to add metadata to a view
- not allowed to set views' properties by ALTER TABLE
- ignore it if trying to set a view's existing property key when the value is the same
- overwrite the value if trying to set a view's existing key to a different value

##### 3. ALTER VIEW UNSET TBLPROPERTIES
**Syntax:**
```SQL
ALTER VIEW view_name UNSET TBLPROPERTIES [IF EXISTS] ('comment', 'key')
```
- to remove metadata from a view
- not allowed to unset views' properties by ALTER TABLE
- issue an exception if trying to unset a view's non-existent key

#### How was this patch tested?
Added test cases to verify if it works properly.

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12324 from gatorsmile/alterView.
2016-04-14 08:34:11 -07:00
gatorsmile 3cf3db17b3 [SPARK-14518][SQL] Support Comment in CREATE VIEW
#### What changes were proposed in this pull request?
**HQL Syntax**: [Create View](https://cwiki.apache.org/confluence/display/Hive/LanguageManual+DDL#LanguageManualDDL-Create/Drop/AlterView
)
```SQL
CREATE VIEW [IF NOT EXISTS] [db_name.]view_name [(column_name [COMMENT column_comment], ...) ]
  [COMMENT view_comment]
  [TBLPROPERTIES (property_name = property_value, ...)]
  AS SELECT ...;
```
Add a support for the `[COMMENT view_comment]` clause

#### How was this patch tested?
Modified the existing test cases to verify the correctness.

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12288 from gatorsmile/addCommentInCreateView.
2016-04-14 08:08:09 -07:00
hyukjinkwon 6fc3dc8839 [MINOR][SQL] Remove extra anonymous closure within functional transformations
## What changes were proposed in this pull request?

This PR removes extra anonymous closure within functional transformations.

For example,

```scala
.map(item => {
  ...
})
```

which can be just simply as below:

```scala
.map { item =>
  ...
}
```

## How was this patch tested?

Related unit tests and `sbt scalastyle`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12382 from HyukjinKwon/minor-extra-closers.
2016-04-14 09:43:41 +01:00
hyukjinkwon b4819404a6 [SPARK-14596][SQL] Remove not used SqlNewHadoopRDD and some more unused imports
## What changes were proposed in this pull request?

Old `HadoopFsRelation` API includes `buildInternalScan()` which uses `SqlNewHadoopRDD` in `ParquetRelation`.
Because now the old API is removed, `SqlNewHadoopRDD` is not used anymore.

So, this PR removes `SqlNewHadoopRDD` and several unused imports.

This was discussed in https://github.com/apache/spark/pull/12326.

## How was this patch tested?

Several related existing unit tests and `sbt scalastyle`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12354 from HyukjinKwon/SPARK-14596.
2016-04-14 15:43:44 +08:00
Davies Liu 62b7f306fb [SPARK-14607] [SPARK-14484] [SQL] fix case-insensitive predicates in FileSourceStrategy
## What changes were proposed in this pull request?

When prune the partitions or push down predicates, case-sensitivity is not respected. In order to make it work with case-insensitive, this PR update the AttributeReference inside predicate to use the name from schema.

## How was this patch tested?

Add regression tests for case-insensitive.

Author: Davies Liu <davies@databricks.com>

Closes #12371 from davies/case_insensi.
2016-04-13 17:17:19 -07:00
Davies Liu dbbe149070 [SPARK-14581] [SQL] push predicatese through more logical plans
## What changes were proposed in this pull request?

Right now, filter push down only works with Project, Aggregate, Generate and Join, they can't be pushed through many other plans.

This PR added support for Union, Intersect, Except and all unary plans.

## How was this patch tested?

Added tests.

Author: Davies Liu <davies@databricks.com>

Closes #12342 from davies/filter_hint.
2016-04-13 13:01:13 -07:00
Andrew Or 7d2ed8cc03 [SPARK-14388][SQL] Implement CREATE TABLE
## What changes were proposed in this pull request?

This patch implements the `CREATE TABLE` command using the `SessionCatalog`. Previously we handled only `CTAS` and `CREATE TABLE ... USING`. This requires us to refactor `CatalogTable` to accept various fields (e.g. bucket and skew columns) and pass them to Hive.

WIP: Note that I haven't verified whether this actually works yet! But I believe it does.

## How was this patch tested?

Tests will come in a future commit.

Author: Andrew Or <andrew@databricks.com>
Author: Yin Huai <yhuai@databricks.com>

Closes #12271 from andrewor14/create-table-ddl.
2016-04-13 11:08:34 -07:00
Wenchen Fan a5f8c9b15b [SPARK-14554][SQL][FOLLOW-UP] use checkDataset to check the result
## What changes were proposed in this pull request?

address this comment: https://github.com/apache/spark/pull/12322#discussion_r59417359

## How was this patch tested?

N/A

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12346 from cloud-fan/tmp.
2016-04-13 11:41:09 +08:00
hyukjinkwon 587cd554af [MINOR][SQL] Remove some unused imports in datasources.
## What changes were proposed in this pull request?

It looks several recent commits for datasources (maybe while removing old `HadoopFsRelation` interface) missed removing some unused imports.

This PR removes some unused imports in datasources.

## How was this patch tested?

`sbt scalastyle` and some unit tests for them.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12326 from HyukjinKwon/minor-imports.
2016-04-13 10:20:03 +08:00
Shixiong Zhu 768b3d623c [SPARK-14579][SQL] Fix a race condition in StreamExecution.processAllAvailable
## What changes were proposed in this pull request?

There is a race condition in `StreamExecution.processAllAvailable`. Here is an execution order to reproduce it.

| Time        |Thread 1           | MicroBatchThread  |
|:-------------:|:-------------:|:-----:|
| 1 | |  `dataAvailable in constructNextBatch` returns false  |
| 2 | addData(newData)      |   |
| 3 | `noNewData = false` in  processAllAvailable |  |
| 4 | | noNewData = true |
| 5 | `noNewData` is true so just return | |

The root cause is that `checking dataAvailable and change noNewData to true` is not atomic. This PR puts these two actions into `synchronized` to make sure they are atomic.

In addition, this PR also has the following changes:

- Make `committedOffsets` and `availableOffsets` volatile to make sure they can be seen in other threads.
- Copy the reference of `availableOffsets` to a local variable so that `sourceStatuses` can use a snapshot of `availableOffsets`.

## How was this patch tested?

Existing unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12339 from zsxwing/race-condition.
2016-04-12 17:31:47 -07:00
Davies Liu 372baf0479 [SPARK-14578] [SQL] Fix codegen for CreateExternalRow with nested wide schema
## What changes were proposed in this pull request?

The wide schema, the expression of fields will be splitted into multiple functions, but the variable for loopVar can't be accessed in splitted functions, this PR change them as class member.

## How was this patch tested?

Added regression test.

Author: Davies Liu <davies@databricks.com>

Closes #12338 from davies/nested_row.
2016-04-12 17:26:37 -07:00
Davies Liu 1ef5f8cfa6 [SPARK-14544] [SQL] improve performance of SQL UI tab
## What changes were proposed in this pull request?

This PR improve the performance of SQL UI by:

1) remove the details column in all executions page (the first page in SQL tab). We can check the details by enter the execution page.
2) break-all is super slow in Chrome recently, so switch to break-word.
3) Using "display: none" to hide a block.
4) using one js closure for  for all the executions, not one for each.
5) remove the height limitation of details, don't need to scroll it in the tiny window.

## How was this patch tested?

Exists tests.

![ui](https://cloud.githubusercontent.com/assets/40902/14445712/68d7b258-0004-11e6-9b48-5d329b05d165.png)

Author: Davies Liu <davies@databricks.com>

Closes #12311 from davies/ui_perf.
2016-04-12 15:03:00 -07:00
bomeng bcd2076274 [SPARK-14414][SQL] improve the error message class hierarchy
## What changes were proposed in this pull request?

Before we are using `AnalysisException`, `ParseException`, `NoSuchFunctionException` etc when a parsing error encounters. I am trying to make it consistent and also **minimum** code impact to the current implementation by changing the class hierarchy.
1. `NoSuchItemException` is removed, since it is an abstract class and it just simply takes a message string.
2. `NoSuchDatabaseException`, `NoSuchTableException`, `NoSuchPartitionException` and `NoSuchFunctionException` now extends `AnalysisException`, as well as `ParseException`, they are all under `AnalysisException` umbrella, but you can also determine how to use them in a granular way.

## How was this patch tested?
The existing test cases should cover this patch.

Author: bomeng <bmeng@us.ibm.com>

Closes #12314 from bomeng/SPARK-14414.
2016-04-12 13:43:39 -07:00
Davies Liu 85e68b4bea [SPARK-14562] [SQL] improve constraints propagation in Union
## What changes were proposed in this pull request?

Currently, Union only takes intersect of the constraints from it's children, all others are dropped, we should try to merge them together.

This PR try to merge the constraints that have the same reference but came from different children, for example: `a > 10` and `a < 100` could be merged as `a > 10 || a < 100`.

## How was this patch tested?

Added more cases in existing test.

Author: Davies Liu <davies@databricks.com>

Closes #12328 from davies/union_const.
2016-04-12 12:29:54 -07:00
Liwei Lin 852bbc6c00 [SPARK-14556][SQL] Code clean-ups for package o.a.s.sql.execution.streaming.state
## What changes were proposed in this pull request?

- `StateStoreConf.**max**DeltasForSnapshot` was renamed to `StateStoreConf.**min**DeltasForSnapshot`
- some state switch checks were added
- improved consistency between method names and string literals
- other comments & typo fix

## How was this patch tested?

N/A

Author: Liwei Lin <lwlin7@gmail.com>

Closes #12323 from lw-lin/streaming-state-clean-up.
2016-04-12 11:50:51 -07:00
Shixiong Zhu 6bf692147c [SPARK-14474][SQL] Move FileSource offset log into checkpointLocation
## What changes were proposed in this pull request?

Now that we have a single location for storing checkpointed state. This PR just propagates the checkpoint location into FileStreamSource so that we don't have one random log off on its own.

## How was this patch tested?

test("metadataPath should be in checkpointLocation")

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12247 from zsxwing/file-source-log-location.
2016-04-12 10:46:28 -07:00
Cheng Lian 124cbfb683 [SPARK-14488][SPARK-14493][SQL] "CREATE TEMPORARY TABLE ... USING ... AS SELECT" shouldn't create persisted table
## What changes were proposed in this pull request?

When planning logical plan node `CreateTableUsingAsSelect`, we neglected its `temporary` field and always generates a `CreateMetastoreDataSourceAsSelect`. This PR fixes this issue generating `CreateTempTableUsingAsSelect` when `temporary` is true.

This PR also fixes SPARK-14493 since the root cause of SPARK-14493 is that we were `CreateMetastoreDataSourceAsSelect` uses default Hive warehouse location when `PATH` data source option is absent.

## How was this patch tested?

Added a test case to create a temporary table using the target syntax and check whether it's indeed a temporary table.

Author: Cheng Lian <lian@databricks.com>

Closes #12303 from liancheng/spark-14488-fix-ctas-using.
2016-04-12 22:28:57 +08:00
Dongjoon Hyun b0f5497e95 [SPARK-14508][BUILD] Add a new ScalaStyle Rule OmitBracesInCase
## What changes were proposed in this pull request?

According to the [Spark Code Style Guide](https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide) and [Scala Style Guide](http://docs.scala-lang.org/style/control-structures.html#curlybraces), we had better enforce the following rule.
  ```
  case: Always omit braces in case clauses.
  ```
This PR makes a new ScalaStyle rule, 'OmitBracesInCase', and enforces it to the code.

## How was this patch tested?

Pass the Jenkins tests (including Scala style checking)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12280 from dongjoon-hyun/SPARK-14508.
2016-04-12 00:43:28 -07:00
Wenchen Fan 678b96e77b [SPARK-14535][SQL] Remove buildInternalScan from FileFormat
## What changes were proposed in this pull request?

Now `HadoopFsRelation` with all kinds of file formats can be handled in `FileSourceStrategy`, we can remove the branches for  `HadoopFsRelation` in `FileSourceStrategy` and the `buildInternalScan` API from `FileFormat`.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12300 from cloud-fan/remove.
2016-04-11 22:59:42 -07:00
Wenchen Fan 52a801124f [SPARK-14554][SQL] disable whole stage codegen if there are too many input columns
## What changes were proposed in this pull request?

In https://github.com/apache/spark/pull/12047/files#diff-94a1f59bcc9b6758c4ca874652437634R529, we may split field expressions codes in `CreateExternalRow` to support wide table. However, the whole stage codegen framework doesn't support it, because the input for expressions is not always the input row, but can be `CodeGenContext.currentVars`, which doesn't work well with `CodeGenContext.splitExpressions`.

Actually we do have a check to guard against this cases, but it's incomplete, it only checks output fields.

This PR improves the whole stage codegen support check, to disable it if there are too many input fields, so that we can avoid splitting field expressions codes in `CreateExternalRow` for whole stage codegen.

TODO: Is it a better solution if we can make `CodeGenContext.currentVars` work well with `CodeGenContext.splitExpressions`?

## How was this patch tested?

new test in DatasetSuite.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12322 from cloud-fan/codegen.
2016-04-11 22:58:35 -07:00
gatorsmile 2d81ba542e [SPARK-14362][SPARK-14406][SQL][FOLLOW-UP] DDL Native Support: Drop View and Drop Table
#### What changes were proposed in this pull request?
In this PR, we are trying to address the comment in the original PR: dfce9665c4 (commitcomment-17057030)

In this PR, we checks if table/view exists at the beginning and then does not need to capture the exceptions, including `NoSuchTableException` and `InvalidTableException`. We still capture the NonFatal exception when doing `sqlContext.cacheManager.tryUncacheQuery`.

#### How was this patch tested?
The existing test cases should cover the code changes of this PR.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12321 from gatorsmile/dropViewFollowup.
2016-04-11 22:33:05 -07:00
Andrew Or 83fb96403b [SPARK-14132][SPARK-14133][SQL] Alter table partition DDLs
## What changes were proposed in this pull request?

This implements a few alter table partition commands using the `SessionCatalog`. In particular:
```
ALTER TABLE ... ADD PARTITION ...
ALTER TABLE ... DROP PARTITION ...
ALTER TABLE ... RENAME PARTITION ... TO ...
```
The following operations are not supported, and an `AnalysisException` with a helpful error message will be thrown if the user tries to use them:
```
ALTER TABLE ... EXCHANGE PARTITION ...
ALTER TABLE ... ARCHIVE PARTITION ...
ALTER TABLE ... UNARCHIVE PARTITION ...
ALTER TABLE ... TOUCH ...
ALTER TABLE ... COMPACT ...
ALTER TABLE ... CONCATENATE
MSCK REPAIR TABLE ...
```

## How was this patch tested?

`DDLSuite`, `DDLCommandSuite` and `HiveDDLCommandSuite`

Author: Andrew Or <andrew@databricks.com>

Closes #12220 from andrewor14/alter-partition-ddl.
2016-04-11 20:59:45 -07:00
Liang-Chi Hsieh 26d7af9119 [SPARK-14520][SQL] Use correct return type in VectorizedParquetInputFormat
## What changes were proposed in this pull request?
JIRA: https://issues.apache.org/jira/browse/SPARK-14520

`VectorizedParquetInputFormat` inherits `ParquetInputFormat` and overrides `createRecordReader`. However, its overridden `createRecordReader` returns a `ParquetRecordReader`. It should return a `RecordReader`. Otherwise, `ClassCastException` will be thrown.

## How was this patch tested?

Existing tests.

Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12292 from viirya/fix-vectorized-input-format.
2016-04-11 19:06:38 -07:00
Eric Liang 6f27027d96 [SPARK-14475] Propagate user-defined context from driver to executors
## What changes were proposed in this pull request?

This adds a new API call `TaskContext.getLocalProperty` for getting properties set in the driver from executors. These local properties are automatically propagated from the driver to executors. For streaming, the context for streaming tasks will be the initial driver context when ssc.start() is called.

## How was this patch tested?

Unit tests.

cc JoshRosen

Author: Eric Liang <ekl@databricks.com>

Closes #12248 from ericl/sc-2813.
2016-04-11 18:33:54 -07:00
Shixiong Zhu 2dacc81ec3 [SPARK-14494][SQL] Fix the race conditions in MemoryStream and MemorySink
## What changes were proposed in this pull request?

Make sure accessing mutable variables in MemoryStream and MemorySink are protected by `synchronized`.
This is probably why MemorySinkSuite failed here: https://amplab.cs.berkeley.edu/jenkins/job/spark-master-test-sbt-hadoop-2.2/650/testReport/junit/org.apache.spark.sql.streaming/MemorySinkSuite/registering_as_a_table/

## How was this patch tested?
Existing unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12261 from zsxwing/memory-race-condition.
2016-04-11 10:42:51 -07:00
Dongjoon Hyun 5de26194a3 [SPARK-14502] [SQL] Add optimization for Binary Comparison Simplification
## What changes were proposed in this pull request?

We can simplifies binary comparisons with semantically-equal operands:

1. Replace '<=>' with 'true' literal.
2. Replace '=', '<=', and '>=' with 'true' literal if both operands are non-nullable.
3. Replace '<' and '>' with 'false' literal if both operands are non-nullable.

For example, the following example plan
```
scala> sql("SELECT * FROM (SELECT explode(array(1,2,3)) a) T WHERE a BETWEEN a AND a+7").explain()
...
:  +- Filter ((a#59 >= a#59) && (a#59 <= (a#59 + 7)))
...
```
will be optimized into the following.
```
:  +- Filter (a#47 <= (a#47 + 7))
```

## How was this patch tested?

Pass the Jenkins tests including new `BinaryComparisonSimplificationSuite`.

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12267 from dongjoon-hyun/SPARK-14502.
2016-04-11 09:52:50 -07:00
Davies Liu 652c470309 [SPARK-14528] [SQL] Fix same result of Union
## What changes were proposed in this pull request?

This PR fix resultResult() for Union.

## How was this patch tested?

Added regression test.

Author: Davies Liu <davies@databricks.com>

Closes #12295 from davies/fix_sameResult.
2016-04-11 09:43:16 -07:00
Rekha Joshi e82d95bf63 [SPARK-14372][SQL] Dataset.randomSplit() needs a Java version
## What changes were proposed in this pull request?

1.Added method randomSplitAsList() in Dataset for java
for https://issues.apache.org/jira/browse/SPARK-14372

## How was this patch tested?

TestSuite

Author: Rekha Joshi <rekhajoshm@gmail.com>
Author: Joshi <rekhajoshm@gmail.com>

Closes #12184 from rekhajoshm/SPARK-14372.
2016-04-11 17:13:30 +08:00
gatorsmile 9f838bd242 [SPARK-14362][SPARK-14406][SQL][FOLLOW-UP] DDL Native Support: Drop View and Drop Table
#### What changes were proposed in this pull request?
This PR is to address the comment: https://github.com/apache/spark/pull/12146#discussion-diff-59092238. It removes the function `isViewSupported` from `SessionCatalog`. After the removal, we still can capture the user errors if users try to drop a table using `DROP VIEW`.

#### How was this patch tested?
Modified the existing test cases

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12284 from gatorsmile/followupDropTable.
2016-04-10 20:46:15 -07:00
Davies Liu fbf8d00883 [SPARK-14419] [MINOR] coding style cleanup
## What changes were proposed in this pull request?

Making them more consistent.

## How was this patch tested?

Existing tests.

Author: Davies Liu <davies@databricks.com>

Closes #12289 from davies/cleanup_style.
2016-04-10 18:10:44 -07:00
Dongjoon Hyun a7ce473bd0 [SPARK-14415][SQL] All functions should show usages by command DESC FUNCTION
## What changes were proposed in this pull request?

Currently, many functions do now show usages like the followings.
```
scala> sql("desc function extended `sin`").collect().foreach(println)
[Function: sin]
[Class: org.apache.spark.sql.catalyst.expressions.Sin]
[Usage: To be added.]
[Extended Usage:
To be added.]
```

This PR adds descriptions for functions and adds a testcase prevent adding function without usage.
```
scala>  sql("desc function extended `sin`").collect().foreach(println);
[Function: sin]
[Class: org.apache.spark.sql.catalyst.expressions.Sin]
[Usage: sin(x) - Returns the sine of x.]
[Extended Usage:
> SELECT sin(0);
 0.0]
```

The only exceptions are `cube`, `grouping`, `grouping_id`, `rollup`, `window`.

## How was this patch tested?

Pass the Jenkins tests (including new testcases.)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12185 from dongjoon-hyun/SPARK-14415.
2016-04-10 11:46:45 -07:00
Yin Huai 3fb09afd5e [SPARK-14506][SQL] HiveClientImpl's toHiveTable misses a table property for external tables
## What changes were proposed in this pull request?

For an external table's metadata (in Hive's representation), its table type needs to be EXTERNAL_TABLE. Also, there needs to be a field called EXTERNAL set in the table property with a value of TRUE (for a MANAGED_TABLE it will be FALSE) based on https://github.com/apache/hive/blob/release-1.2.1/metastore/src/java/org/apache/hadoop/hive/metastore/ObjectStore.java#L1095-L1105. HiveClientImpl's toHiveTable misses to set this table property.

## How was this patch tested?

Added a new test.

Author: Yin Huai <yhuai@databricks.com>

Closes #12275 from yhuai/SPARK-14506.
2016-04-09 23:32:17 -07:00
Dongjoon Hyun aea30a1a9b [SPARK-14465][BUILD] Checkstyle should check all Java files
## What changes were proposed in this pull request?

Currently, `checkstyle` is configured to check the files under `src/main/java`. However, Spark has Java files in `src/main/scala`, too. This PR fixes the following configuration in `pom.xml` and the unchecked-so-far violations on those files.
```xml
-<sourceDirectory>${basedir}/src/main/java</sourceDirectory>
+<sourceDirectories>${basedir}/src/main/java,${basedir}/src/main/scala</sourceDirectories>
```

## How was this patch tested?

After passing the Jenkins build and manually `dev/lint-java`. (Note that Jenkins does not run `lint-java`)

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12242 from dongjoon-hyun/SPARK-14465.
2016-04-09 21:31:20 -07:00
Nong Li 5989c85b53 [SPARK-14217] [SQL] Fix bug if parquet data has columns that use dictionary encoding for some of the data
## What changes were proposed in this pull request?

This PR is based on #12017

Currently, this causes batches where some values are dictionary encoded and some
which are not. The non-dictionary encoded values cause us to remove the dictionary
from the batch causing the first values to return garbage.

This patch fixes the issue by first decoding the dictionary for the values that are
already dictionary encoded before switching. A similar thing is done for the reverse
case where the initial values are not dictionary encoded.

## How was this patch tested?

This is difficult to test but replicated on a test cluster using a large tpcds data set.

Author: Nong Li <nong@databricks.com>
Author: Davies Liu <davies@databricks.com>

Closes #12279 from davies/fix_dict.
2016-04-09 17:45:10 -07:00
Davies Liu 5cb5edaf9c [SPARK-14419] [SQL] Improve HashedRelation for key fit within Long
## What changes were proposed in this pull request?

Currently, we use java HashMap for HashedRelation if the key could fit within a Long. The java HashMap and CompactBuffer are not memory efficient, the memory used by them is also accounted accurately.

This PR introduce a LongToUnsafeRowMap (similar to BytesToBytesMap) for better memory efficiency and performance.

This PR reopen #12190 to fix bugs.

## How was this patch tested?

Existing tests.

Author: Davies Liu <davies@databricks.com>

Closes #12278 from davies/long_map3.
2016-04-09 17:44:38 -07:00
gatorsmile dfce9665c4 [SPARK-14362][SPARK-14406][SQL] DDL Native Support: Drop View and Drop Table
#### What changes were proposed in this pull request?

This PR is to provide a native support for DDL `DROP VIEW` and `DROP TABLE`. The PR includes native parsing and native analysis.

Based on the HIVE DDL document for [DROP_VIEW_WEB_LINK](https://cwiki.apache.org/confluence/display/Hive/LanguageManual+DDL#LanguageManualDDL-
DropView
), `DROP VIEW` is defined as,
**Syntax:**
```SQL
DROP VIEW [IF EXISTS] [db_name.]view_name;
```
 - to remove metadata for the specified view.
 - illegal to use DROP TABLE on a view.
 - illegal to use DROP VIEW on a table.
 - this command only works in `HiveContext`. In `SQLContext`, we will get an exception.

This PR also handles `DROP TABLE`.
**Syntax:**
```SQL
DROP TABLE [IF EXISTS] table_name [PURGE];
```
- Previously, the `DROP TABLE` command only can drop Hive tables in `HiveContext`. Now, after this PR, this command also can drop temporary table, external table, external data source table in `SQLContext`.
- In `HiveContext`, we will not issue an exception if the to-be-dropped table does not exist and users did not specify `IF EXISTS`. Instead, we just log an error message. If `IF EXISTS` is specified, we will not issue any error message/exception.
- In `SQLContext`, we will issue an exception if the to-be-dropped table does not exist, unless `IF EXISTS` is specified.
- Data will not be deleted if the tables are `external`, unless table type is `managed_table`.

#### How was this patch tested?
For verifying command parsing, added test cases in `spark/sql/hive/HiveDDLCommandSuite.scala`
For verifying command analysis, added test cases in `spark/sql/hive/execution/HiveDDLSuite.scala`

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12146 from gatorsmile/dropView.
2016-04-09 17:40:36 -07:00
gatorsmile 9be5558e00 [SPARK-14481][SQL] Issue Exceptions for All Unsupported Options during Parsing
#### What changes were proposed in this pull request?
"Not good to slightly ignore all the un-supported options/clauses. We should either support it or throw an exception." A comment from yhuai in another PR https://github.com/apache/spark/pull/12146

- Can `Explain` be an exception? The `Formatted` clause is used in `HiveCompatibilitySuite`.
- Two unsupported clauses in `Drop Table` are handled in a separate PR: https://github.com/apache/spark/pull/12146

#### How was this patch tested?
Test cases are added to verify all the cases.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12255 from gatorsmile/warningToException.
2016-04-09 14:10:44 -07:00
Yong Tang cd2fed7012 [SPARK-14335][SQL] Describe function command returns wrong output
## What changes were proposed in this pull request?

…because some of built-in functions are not in function registry.

This fix tries to fix issues in `describe function` command where some of the outputs
still shows Hive's function because some built-in functions are not in FunctionRegistry.

The following built-in functions have been added to FunctionRegistry:
```
-
!
*
/
&
%
^
+
<
<=
<=>
=
==
>
>=
|
~
and
in
like
not
or
rlike
when
```

The following listed functions are not added, but hard coded in `commands.scala` (hvanhovell):
```
!=
<>
between
case
```
Below are the existing result of the above functions that have not been added:
```
spark-sql> describe function `!=`;
Function: <>
Class: org.apache.hadoop.hive.ql.udf.generic.GenericUDFOPNotEqual
Usage: a <> b - Returns TRUE if a is not equal to b
```
```
spark-sql> describe function `<>`;
Function: <>
Class: org.apache.hadoop.hive.ql.udf.generic.GenericUDFOPNotEqual
Usage: a <> b - Returns TRUE if a is not equal to b
```
```
spark-sql> describe function `between`;
Function: between
Class: org.apache.hadoop.hive.ql.udf.generic.GenericUDFBetween
Usage: between a [NOT] BETWEEN b AND c - evaluate if a is [not] in between b and c
```
```
spark-sql> describe function `case`;
Function: case
Class: org.apache.hadoop.hive.ql.udf.generic.GenericUDFCase
Usage: CASE a WHEN b THEN c [WHEN d THEN e]* [ELSE f] END - When a = b, returns c; when a = d, return e; else return f
```

## How was this patch tested?

Existing tests passed. Additional test cases added.

Author: Yong Tang <yong.tang.github@outlook.com>

Closes #12128 from yongtang/SPARK-14335.
2016-04-09 13:54:30 -07:00
Davies Liu f7ec854f1b Revert "[SPARK-14419] [SQL] Improve HashedRelation for key fit within Long"
This reverts commit 90c0a04506.
2016-04-09 13:51:28 -07:00
bomeng 10a95781ee [SPARK-14496][SQL] fix some javadoc typos
## What changes were proposed in this pull request?

Minor issues. Found 2 typos while browsing the code.

## How was this patch tested?
None.

Author: bomeng <bmeng@us.ibm.com>

Closes #12264 from bomeng/SPARK-14496.
2016-04-09 22:30:54 +09:00
Davies Liu 90c0a04506 [SPARK-14419] [SQL] Improve HashedRelation for key fit within Long
## What changes were proposed in this pull request?

Currently, we use java HashMap for HashedRelation if the key could fit within a Long. The java HashMap and CompactBuffer are not memory efficient, the memory used by them is also accounted accurately.

This PR introduce a LongToUnsafeRowMap (similar to BytesToBytesMap) for better memory efficiency and performance.

## How was this patch tested?

Updated existing tests.

Author: Davies Liu <davies@databricks.com>

Closes #12190 from davies/long_map2.
2016-04-09 00:37:55 -07:00
Reynold Xin 520dde48d0 [SPARK-14451][SQL] Move encoder definition into Aggregator interface
## What changes were proposed in this pull request?
When we first introduced Aggregators, we required the user of Aggregators to (implicitly) specify the encoders. It would actually make more sense to have the encoders be specified by the implementation of Aggregators, since each implementation should have the most state about how to encode its own data type.

Note that this simplifies the Java API because Java users no longer need to explicitly specify encoders for aggregators.

## How was this patch tested?
Updated unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12231 from rxin/SPARK-14451.
2016-04-09 00:00:39 -07:00
Reynold Xin 2f0b882e5c [SPARK-14482][SQL] Change default Parquet codec from gzip to snappy
## What changes were proposed in this pull request?
Based on our tests, gzip decompression is very slow (< 100MB/s), making queries decompression bound. Snappy can decompress at ~ 500MB/s on a single core.

This patch changes the default compression codec for Parquet output from gzip to snappy, and also introduces a ParquetOptions class to be more consistent with other data sources (e.g. CSV, JSON).

## How was this patch tested?
Should be covered by existing unit tests.

Author: Reynold Xin <rxin@databricks.com>

Closes #12256 from rxin/SPARK-14482.
2016-04-08 23:52:04 -07:00
Joseph K. Bradley d7af736b2c [SPARK-14498][ML][PYTHON][SQL] Many cleanups to ML and ML-related docs
## What changes were proposed in this pull request?

Cleanups to documentation.  No changes to code.
* GBT docs: Move Scala doc for private object GradientBoostedTrees to public docs for GBTClassifier,Regressor
* GLM regParam: needs doc saying it is for L2 only
* TrainValidationSplitModel: add .. versionadded:: 2.0.0
* Rename “_transformer_params_from_java” to “_transfer_params_from_java”
* LogReg Summary classes: “probability” col should not say “calibrated”
* LR summaries: coefficientStandardErrors —> document that intercept stderr comes last.  Same for t,p-values
* approxCountDistinct: Document meaning of “rsd" argument.
* LDA: note which params are for online LDA only

## How was this patch tested?

Doc build

Author: Joseph K. Bradley <joseph@databricks.com>

Closes #12266 from jkbradley/ml-doc-cleanups.
2016-04-08 20:15:44 -07:00
Sameer Agarwal 813e96e6fa [SPARK-14454] Better exception handling while marking tasks as failed
## What changes were proposed in this pull request?

This patch adds support for better handling of exceptions inside catch blocks if the code within the block throws an exception. For instance here is the code in a catch block before this change in `WriterContainer.scala`:

```scala
logError("Aborting task.", cause)
// call failure callbacks first, so we could have a chance to cleanup the writer.
TaskContext.get().asInstanceOf[TaskContextImpl].markTaskFailed(cause)
if (currentWriter != null) {
  currentWriter.close()
}
abortTask()
throw new SparkException("Task failed while writing rows.", cause)
```

If `markTaskFailed` or `currentWriter.close` throws an exception, we currently lose the original cause. This PR fixes this problem by implementing a utility function `Utils.tryWithSafeCatch` that suppresses (`Throwable.addSuppressed`) the exception that are thrown within the catch block and rethrowing the original exception.

## How was this patch tested?

No new functionality added

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12234 from sameeragarwal/fix-exception.
2016-04-08 17:23:32 -07:00
Josh Rosen 464a3c1e02 [SPARK-14435][BUILD] Shade Kryo in our custom Hive 1.2.1 fork
This patch updates our custom Hive 1.2.1 fork in order to shade Kryo in Hive. This is a blocker for upgrading Spark to use Kryo 3 (see #12076).

The source for this new fork of Hive can be found at https://github.com/JoshRosen/hive/tree/release-1.2.1-spark2

Here's the complete diff from the official Hive 1.2.1 release: https://github.com/apache/hive/compare/release-1.2.1...JoshRosen:release-1.2.1-spark2

Here's the diff from the sources that pwendell used to publish the current `1.2.1.spark` release of Hive: https://github.com/pwendell/hive/compare/release-1.2.1-spark...JoshRosen:release-1.2.1-spark2. This diff looks large because his branch used a shell script to rewrite the groupId, whereas I had to commit the groupId changes in order to prevent the find-and-replace from affecting the package names in our relocated Kryo classes: https://github.com/pwendell/hive/compare/release-1.2.1-spark...JoshRosen:release-1.2.1-spark2#diff-6ada9aaec70e069df8f2c34c5519dd1e

Using these changes, I was able to publish a local version of Hive and verify that this change fixes the test failures which are blocking #12076. Note that this PR will not compile until we complete the review of the Hive POM changes and stage and publish a release.

/cc vanzin, steveloughran, and pwendell for review.

Author: Josh Rosen <joshrosen@databricks.com>

Closes #12215 from JoshRosen/shade-kryo-in-hive.
2016-04-08 13:58:58 -07:00
Sameer Agarwal f8c9beca38 [SPARK-14394][SQL] Generate AggregateHashMap class for LongTypes during TungstenAggregate codegen
## What changes were proposed in this pull request?

This PR adds support for generating the `AggregateHashMap` class in `TungstenAggregate` if the aggregate group by keys/value are of `LongType`. Note that currently this generate aggregate is not actually used.

NB: This currently only supports `LongType` keys/values (please see `isAggregateHashMapSupported` in `TungstenAggregate`) and will be generalized to other data types in a subsequent PR.

## How was this patch tested?

Manually inspected the generated code. This is what the generated map looks like for 2 keys:

```java
/* 068 */   public class agg_GeneratedAggregateHashMap {
/* 069 */     private org.apache.spark.sql.execution.vectorized.ColumnarBatch batch;
/* 070 */     private int[] buckets;
/* 071 */     private int numBuckets;
/* 072 */     private int maxSteps;
/* 073 */     private int numRows = 0;
/* 074 */     private org.apache.spark.sql.types.StructType schema =
/* 075 */     new org.apache.spark.sql.types.StructType()
/* 076 */     .add("k1", org.apache.spark.sql.types.DataTypes.LongType)
/* 077 */     .add("k2", org.apache.spark.sql.types.DataTypes.LongType)
/* 078 */     .add("sum", org.apache.spark.sql.types.DataTypes.LongType);
/* 079 */
/* 080 */     public agg_GeneratedAggregateHashMap(int capacity, double loadFactor, int maxSteps) {
/* 081 */       assert (capacity > 0 && ((capacity & (capacity - 1)) == 0));
/* 082 */       this.maxSteps = maxSteps;
/* 083 */       numBuckets = (int) (capacity / loadFactor);
/* 084 */       batch = org.apache.spark.sql.execution.vectorized.ColumnarBatch.allocate(schema,
/* 085 */         org.apache.spark.memory.MemoryMode.ON_HEAP, capacity);
/* 086 */       buckets = new int[numBuckets];
/* 087 */       java.util.Arrays.fill(buckets, -1);
/* 088 */     }
/* 089 */
/* 090 */     public agg_GeneratedAggregateHashMap() {
/* 091 */       new agg_GeneratedAggregateHashMap(1 << 16, 0.25, 5);
/* 092 */     }
/* 093 */
/* 094 */     public org.apache.spark.sql.execution.vectorized.ColumnarBatch.Row findOrInsert(long agg_key, long agg_key1) {
/* 095 */       long h = hash(agg_key, agg_key1);
/* 096 */       int step = 0;
/* 097 */       int idx = (int) h & (numBuckets - 1);
/* 098 */       while (step < maxSteps) {
/* 099 */         // Return bucket index if it's either an empty slot or already contains the key
/* 100 */         if (buckets[idx] == -1) {
/* 101 */           batch.column(0).putLong(numRows, agg_key);
/* 102 */           batch.column(1).putLong(numRows, agg_key1);
/* 103 */           batch.column(2).putLong(numRows, 0);
/* 104 */           buckets[idx] = numRows++;
/* 105 */           return batch.getRow(buckets[idx]);
/* 106 */         } else if (equals(idx, agg_key, agg_key1)) {
/* 107 */           return batch.getRow(buckets[idx]);
/* 108 */         }
/* 109 */         idx = (idx + 1) & (numBuckets - 1);
/* 110 */         step++;
/* 111 */       }
/* 112 */       // Didn't find it
/* 113 */       return null;
/* 114 */     }
/* 115 */
/* 116 */     private boolean equals(int idx, long agg_key, long agg_key1) {
/* 117 */       return batch.column(0).getLong(buckets[idx]) == agg_key && batch.column(1).getLong(buckets[idx]) == agg_key1;
/* 118 */     }
/* 119 */
/* 120 */     // TODO: Improve this Hash Function
/* 121 */     private long hash(long agg_key, long agg_key1) {
/* 122 */       return agg_key ^ agg_key1;
/* 123 */     }
/* 124 */
/* 125 */   }
```

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12161 from sameeragarwal/tungsten-aggregate.
2016-04-08 13:52:28 -07:00
tedyu 02757535b5 [SPARK-14448] Improvements to ColumnVector
## What changes were proposed in this pull request?

In this PR, two changes are proposed for ColumnVector :
1. ColumnVector should be declared as implementing AutoCloseable - it already has close() method
2. In OnHeapColumnVector#reserveInternal(), we only need to allocate new array when existing array is null or the length of existing array is shorter than the newCapacity.

## How was this patch tested?

Existing unit tests.

Author: tedyu <yuzhihong@gmail.com>

Closes #12225 from tedyu/master.
2016-04-08 12:25:36 -07:00
Jacek Laskowski 6447098013 [SPARK-14402][HOTFIX] Fix ExpressionDescription annotation
## What changes were proposed in this pull request?

Fix for the error introduced in c59abad052:

```
/Users/jacek/dev/oss/spark/sql/catalyst/src/main/scala/org/apache/spark/sql/catalyst/expressions/stringExpressions.scala:626: error: annotation argument needs to be a constant; found: "_FUNC_(str) - ".+("Returns str, with the first letter of each word in uppercase, all other letters in ").+("lowercase. Words are delimited by white space.")
    "Returns str, with the first letter of each word in uppercase, all other letters in " +
                                                                                          ^
```

## How was this patch tested?

Local build

Author: Jacek Laskowski <jacek@japila.pl>

Closes #12192 from jaceklaskowski/SPARK-14402-HOTFIX.
2016-04-08 11:36:41 +01:00
hyukjinkwon 73b56a3c6c [SPARK-14189][SQL] JSON data sources find compatible types even if inferred decimal type is not capable of the others
## What changes were proposed in this pull request?

https://issues.apache.org/jira/browse/SPARK-14189

When inferred types in the same field during finding compatible `DataType`, are `IntegralType` and `DecimalType` but `DecimalType` is not capable of the given `IntegralType`, JSON data source simply fails to find a compatible type resulting in `StringType`.

This can be observed when `prefersDecimal` is enabled.

```scala
def mixedIntegerAndDoubleRecords: RDD[String] =
  sqlContext.sparkContext.parallelize(
    """{"a": 3, "b": 1.1}""" ::
    """{"a": 3.1, "b": 1}""" :: Nil)

val jsonDF = sqlContext.read
  .option("prefersDecimal", "true")
  .json(mixedIntegerAndDoubleRecords)
  .printSchema()
```

- **Before**

```
root
 |-- a: string (nullable = true)
 |-- b: string (nullable = true)
```

- **After**

```
root
 |-- a: decimal(21, 1) (nullable = true)
 |-- b: decimal(21, 1) (nullable = true)
```
(Note that integer is inferred as `LongType` which becomes `DecimalType(20, 0)`)

## How was this patch tested?

unit tests were used and style tests by `dev/run_tests`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #11993 from HyukjinKwon/SPARK-14189.
2016-04-08 00:30:26 -07:00
hyukjinkwon 725b860e2b [SPARK-14103][SQL] Parse unescaped quotes in CSV data source.
## What changes were proposed in this pull request?

This PR resolves the problem during parsing unescaped quotes in input data. For example, currently the data below:

```
"a"b,ccc,ddd
e,f,g
```

produces a data below:

- **Before**

```bash
["a"b,ccc,ddd[\n]e,f,g]  <- as a value.
```

- **After**

```bash
["a"b], [ccc], [ddd]
[e], [f], [g]
```

This PR bumps up the Univocity parser's version. This was fixed in `2.0.2`, https://github.com/uniVocity/univocity-parsers/issues/60.

## How was this patch tested?

Unit tests in `CSVSuite` and `sbt/sbt scalastyle`.

Author: hyukjinkwon <gurwls223@gmail.com>

Closes #12226 from HyukjinKwon/SPARK-14103-quote.
2016-04-08 00:28:59 -07:00
Reynold Xin 04fb7dba70 Replace getLocalizedMessage with just normal toString in exception handling in WriterContainer. 2016-04-07 21:41:41 -07:00
Wenchen Fan 49fb237081 [SPARK-14270][SQL] whole stage codegen support for typed filter
## What changes were proposed in this pull request?

We implement typed filter by `MapPartitions`, which doesn't work well with whole stage codegen. This PR use `Filter` to implement typed filter and we can get the whole stage codegen support for free.

This PR also introduced `DeserializeToObject` and `SerializeFromObject`, to seperate serialization logic from object operator, so that it's eaiser to write optimization rules for adjacent object operators.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12061 from cloud-fan/whole-stage-codegen.
2016-04-07 17:23:34 -07:00
Andrew Or ae1db91d15 [SPARK-14410][SQL] Push functions existence check into catalog
## What changes were proposed in this pull request?

This is a followup to #12117 and addresses some of the TODOs introduced there. In particular, the resolution of database is now pushed into session catalog, which knows about the current database. Further, the logic for checking whether a function exists is pushed into the external catalog.

No change in functionality is expected.

## How was this patch tested?

`SessionCatalogSuite`, `DDLSuite`

Author: Andrew Or <andrew@databricks.com>

Closes #12198 from andrewor14/function-exists.
2016-04-07 16:23:17 -07:00
Davies Liu aa852215f8 [SPARK-12740] [SPARK-13932] support grouping()/grouping_id() in having/order clause
## What changes were proposed in this pull request?

This PR brings the support of using grouping()/grouping_id() in HAVING/ORDER BY clause.

The resolved grouping()/grouping_id() will be replaced by unresolved "spark_gropuing_id" virtual attribute, then resolved by ResolveMissingAttribute.

This PR also fix the HAVING clause that access a grouping column that is not presented in SELECT clause, for example:
```sql
select count(1) from (select 1 as a) t group by a having a > 0
```
## How was this patch tested?

Add new tests.

Author: Davies Liu <davies@databricks.com>

Closes #12235 from davies/grouping_having.
2016-04-07 11:51:34 -07:00
Kousuke Saruta 8dcb0c7c97 [SPARK-14456][SQL][MINOR] Remove unused variables and logics in DataSource
## What changes were proposed in this pull request?

In DataSource#write method, the variables `dataSchema` and `equality`, and related logics are no longer used. Let's remove them.

## How was this patch tested?

Existing tests.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #12237 from sarutak/SPARK-14456.
2016-04-07 11:03:39 -07:00
Tathagata Das 3aa7d76395 [SQL][TESTS] Fix for flaky test in ContinuousQueryManagerSuite
## What changes were proposed in this pull request?

The timeouts were lower the other timeouts in the test. Other tests were stable over the last month.

## How was this patch tested?

Jenkins tests.

Author: Tathagata Das <tathagata.das1565@gmail.com>

Closes #12219 from tdas/flaky-test-fix.
2016-04-07 10:51:49 -07:00
Reynold Xin 9ca0760d67 [SPARK-10063][SQL] Remove DirectParquetOutputCommitter
## What changes were proposed in this pull request?
This patch removes DirectParquetOutputCommitter. This was initially created by Databricks as a faster way to write Parquet data to S3. However, given how the underlying S3 Hadoop implementation works, this committer only works when there are no failures. If there are multiple attempts of the same task (e.g. speculation or task failures or node failures), the output data can be corrupted. I don't think this performance optimization outweighs the correctness issue.

## How was this patch tested?
Removed the related tests also.

Author: Reynold Xin <rxin@databricks.com>

Closes #12229 from rxin/SPARK-10063.
2016-04-07 00:51:45 -07:00
Reynold Xin e11aa9ec5c [SPARK-14452][SQL] Explicit APIs in Scala for specifying encoders
## What changes were proposed in this pull request?
The Scala Dataset public API currently only allows users to specify encoders through SQLContext.implicits. This is OK but sometimes people want to explicitly get encoders without a SQLContext (e.g. Aggregator implementations). This patch adds public APIs to Encoders class for getting Scala encoders.

## How was this patch tested?
None - I will update test cases once https://github.com/apache/spark/pull/12231 is merged.

Author: Reynold Xin <rxin@databricks.com>

Closes #12232 from rxin/SPARK-14452.
2016-04-07 00:46:57 -07:00
Marcelo Vanzin 21d5ca128b [SPARK-14134][CORE] Change the package name used for shading classes.
The current package name uses a dash, which is a little weird but seemed
to work. That is, until a new test tried to mock a class that references
one of those shaded types, and then things started failing.

Most changes are just noise to fix the logging configs.

For reference, SPARK-8815 also raised this issue, although at the time it
did not cause any issues in Spark, so it was not addressed.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #11941 from vanzin/SPARK-14134.
2016-04-06 19:33:51 -07:00
Herman van Hovell d76592276f [SPARK-12610][SQL] Left Anti Join
### What changes were proposed in this pull request?

This PR adds support for `LEFT ANTI JOIN` to Spark SQL. A `LEFT ANTI JOIN` is the exact opposite of a `LEFT SEMI JOIN` and can be used to identify rows in one dataset that are not in another dataset. Note that `nulls` on the left side of the join cannot match a row on the right hand side of the join; the result is that left anti join will always select a row with a `null` in one or more of its keys.

We currently add support for the following SQL join syntax:

    SELECT   *
    FROM      tbl1 A
              LEFT ANTI JOIN tbl2 B
               ON A.Id = B.Id

Or using a dataframe:

    tbl1.as("a").join(tbl2.as("b"), $"a.id" === $"b.id", "left_anti)

This PR provides serves as the basis for implementing `NOT EXISTS` and `NOT IN (...)` correlated sub-queries. It would also serve as good basis for implementing an more efficient `EXCEPT` operator.

The PR has been (losely) based on PR's by both davies (https://github.com/apache/spark/pull/10706) and chenghao-intel (https://github.com/apache/spark/pull/10563); credit should be given where credit is due.

This PR adds supports for `LEFT ANTI JOIN` to `BroadcastHashJoin` (including codegeneration), `ShuffledHashJoin` and `BroadcastNestedLoopJoin`.

### How was this patch tested?

Added tests to `JoinSuite` and ported `ExistenceJoinSuite` from https://github.com/apache/spark/pull/10563.

cc davies chenghao-intel rxin

Author: Herman van Hovell <hvanhovell@questtec.nl>

Closes #12214 from hvanhovell/SPARK-12610.
2016-04-06 19:25:10 -07:00
Luciano Resende 611dbce4bd [SPARK-12555][SQL] Result should not be corrupted after input columns are reordered
This PR add test case described in SPARK-12555 to validate that correct data is returned when input data is reordered and to avoid future regressions.

Author: Luciano Resende <lresende@apache.org>

Closes #11623 from lresende/SPARK-12555.
2016-04-07 08:35:00 +08:00
Marcelo Vanzin 864d1b4d66 [SPARK-14436][SQL] Make JavaDatasetAggregatorSuiteBase public.
Without this, unit tests that extend that class fail for me locally
on maven, because JUnit tries to run methods in that class and gets
an IllegalAccessError.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #12212 from vanzin/SPARK-14436.
2016-04-06 16:50:59 -07:00
Dongjoon Hyun d717ae1fd7 [SPARK-14444][BUILD] Add a new scalastyle NoScalaDoc to prevent ScalaDoc-style multiline comments
## What changes were proposed in this pull request?

According to the [Spark Code Style Guide](https://cwiki.apache.org/confluence/display/SPARK/Spark+Code+Style+Guide#SparkCodeStyleGuide-Indentation), this PR adds a new scalastyle rule to prevent the followings.
```
/** In Spark, we don't use the ScalaDoc style so this
  * is not correct.
  */
```

## How was this patch tested?

Pass the Jenkins tests (including `lint-scala`).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12221 from dongjoon-hyun/SPARK-14444.
2016-04-06 16:02:55 -07:00
Davies Liu 5a4b11a901 [SPARK-14224] [SPARK-14223] [SPARK-14310] [SQL] fix RowEncoder and parquet reader for wide table
## What changes were proposed in this pull request?

1) fix the RowEncoder for wide table (many columns) by splitting the generate code into multiple functions.
2) Separate DataSourceScan as RowDataSourceScan and BatchedDataSourceScan
3) Disable the returning columnar batch in parquet reader if there are many columns.
4) Added a internal config for maximum number of fields (nested) columns supported by whole stage codegen.

Closes #12098

## How was this patch tested?

Add a tests for table with 1000 columns.

Author: Davies Liu <davies@databricks.com>

Closes #12047 from davies/many_columns.
2016-04-06 15:33:39 -07:00
Shixiong Zhu a4ead6d388 [SPARK-14382][SQL] QueryProgress should be post after committedOffsets is updated
## What changes were proposed in this pull request?

Make sure QueryProgress is post after committedOffsets is updated. If QueryProgress is post before committedOffsets is updated, the listener may see a wrong sinkStatus (created from committedOffsets).

See https://amplab.cs.berkeley.edu/jenkins/job/spark-master-test-maven-hadoop-2.2/644/testReport/junit/org.apache.spark.sql.util/ContinuousQueryListenerSuite/single_listener/ for an example of the failure.

## How was this patch tested?

Existing unit tests.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12155 from zsxwing/SPARK-14382.
2016-04-06 12:28:04 -07:00
Sameer Agarwal bb1fa5b218 [SPARK-14320][SQL] Make ColumnarBatch.Row mutable
## What changes were proposed in this pull request?

In order to leverage a data structure like `AggregateHashMap` (https://github.com/apache/spark/pull/12055) to speed up aggregates with keys, we need to make `ColumnarBatch.Row` mutable.

## How was this patch tested?

Unit test in `ColumnarBatchSuite`. Also, tested via `BenchmarkWholeStageCodegen`.

Author: Sameer Agarwal <sameer@databricks.com>

Closes #12103 from sameeragarwal/mutable-row.
2016-04-06 11:59:42 -07:00
bomeng 3c8d882165 [SPARK-14383][SQL] missing "|" in the g4 file
## What changes were proposed in this pull request?

A very trivial one. It missed "|" between DISTRIBUTE and UNSET.

## How was this patch tested?

I do not think it is really needed.

Author: bomeng <bmeng@us.ibm.com>

Closes #12156 from bomeng/SPARK-14383.
2016-04-06 11:12:48 -07:00
bomeng 5abd02c02b [SPARK-14429][SQL] Improve LIKE pattern in "SHOW TABLES / FUNCTIONS LIKE <pattern>" DDL
LIKE <pattern> is commonly used in SHOW TABLES / FUNCTIONS etc DDL. In the pattern, user can use `|` or `*` as wildcards.

1. Currently, we used `replaceAll()` to replace `*` with `.*`, but the replacement was scattered in several places; I have created an utility method and use it in all the places;

2. Consistency with Hive: the pattern is case insensitive in Hive and white spaces will be trimmed, but current pattern matching does not do that. For example, suppose we have tables (t1, t2, t3), `SHOW TABLES LIKE ' T* ' ` will list all the t-tables. Please use Hive to verify it.

3. Combined with `|`, the result will be sorted. For pattern like `'  B*|a*  '`, it will list the result in a-b order.

I've made some changes to the utility method to make sure we will get the same result as Hive does.

A new method was created in StringUtil and test cases were added.

andrewor14

Author: bomeng <bmeng@us.ibm.com>

Closes #12206 from bomeng/SPARK-14429.
2016-04-06 11:06:14 -07:00
Kousuke Saruta 10494feae0 [SPARK-14426][SQL] Merge PerserUtils and ParseUtils
## What changes were proposed in this pull request?

We have ParserUtils and ParseUtils which are both utility collections for use during the parsing process.
Those names and what they are used for is very similar so I think we can merge them.

Also, the original unescapeSQLString method may have a fault. When "\u0061" style character literals are passed to the method, it's not unescaped successfully.
This patch fix the bug.

## How was this patch tested?

Added a new test case.

Author: Kousuke Saruta <sarutak@oss.nttdata.co.jp>

Closes #12199 from sarutak/merge-ParseUtils-and-ParserUtils.
2016-04-06 10:57:46 -07:00
Michael Armbrust 59236e5c5b [SPARK-14288][SQL] Memory Sink for streaming
This PR exposes the internal testing `MemorySink` though the data source API.  This will allow users to easily test streaming applications in the Spark shell or other local tests.

Usage:
```scala
inputStream.write
  .format("memory")
  .queryName("memStream")
  .startStream()

// Now you can query the result of the stream here.
sqlContext.table("memStream")
```

The most complicated part of the logic is choosing the checkpoint directory.  There are a few requirements we are attempting to satisfy here:
 - when working in the shell locally, it should just work with no extra configuration.
 - when working on a cluster you should be able to make it easily create the checkpoint on a distributed file system so you can test aggregation (state checkpoints are also stored in this directory and must be accessible from workers).
 - it should be clear that you can't resume since the data is just in memory.

The chosen algorithm proceeds as follows:
 - the user gives a checkpoint directory, use it
 - if the conf has a checkpoint location, use `$location/$queryName`
 - if neither, create a local directory
 - always check to make sure there are no offsets written to the directory

Author: Michael Armbrust <michael@databricks.com>

Closes #12119 from marmbrus/memorySink.
2016-04-06 10:05:02 -07:00
gatorsmile 25a4c8e0c5 [SPARK-14396][BUILD][HOT] Fix compilation against Scala 2.10
#### What changes were proposed in this pull request?
This PR is to fix the compilation errors in Scala 2.10 build, as shown in the link:
https://amplab.cs.berkeley.edu/jenkins/job/spark-master-compile-maven-scala-2.10/735/console
```
[error] /home/jenkins/workspace/spark-master-compile-maven-scala-2.10/sql/hive/src/test/scala/org/apache/spark/sql/hive/HiveDDLCommandSuite.scala:266: value contains is not a member of Option[String]
[error]     assert(desc.viewText.contains("SELECT * FROM tab1"))
[error]                          ^
[error] /home/jenkins/workspace/spark-master-compile-maven-scala-2.10/sql/hive/src/test/scala/org/apache/spark/sql/hive/HiveDDLCommandSuite.scala:267: value contains is not a member of Option[String]
[error]     assert(desc.viewOriginalText.contains("SELECT * FROM tab1"))
[error]                                  ^
[error] /home/jenkins/workspace/spark-master-compile-maven-scala-2.10/sql/hive/src/test/scala/org/apache/spark/sql/hive/HiveDDLCommandSuite.scala:293: value contains is not a member of Option[String]
[error]     assert(desc.viewText.contains("SELECT * FROM tab1"))
[error]                          ^
[error] /home/jenkins/workspace/spark-master-compile-maven-scala-2.10/sql/hive/src/test/scala/org/apache/spark/sql/hive/HiveDDLCommandSuite.scala:294: value contains is not a member of Option[String]
[error]     assert(desc.viewOriginalText.contains("SELECT * FROM tab1"))
[error]                                  ^
[error] four errors found
[error] Compile failed at Apr 5, 2016 10:59:09 PM [10.502s]
```

#### How was this patch tested?
Not sure how to trigger Scala 2.10 compilation in the test environment.

Author: gatorsmile <gatorsmile@gmail.com>

Closes #12201 from gatorsmile/buildBreak2.10.
2016-04-06 15:48:28 +02:00
gatorsmile 68be5b9e8a [SPARK-14396][SQL] Throw Exceptions for DDLs of Partitioned Views
#### What changes were proposed in this pull request?

Because the concept of partitioning is associated with physical tables, we disable all the supports of partitioned views, which are defined in the following three commands in [Hive DDL Manual](https://cwiki.apache.org/confluence/display/Hive/LanguageManual+DDL#LanguageManualDDL-Create/Drop/AlterView):
```
ALTER VIEW view DROP [IF EXISTS] PARTITION spec1[, PARTITION spec2, ...];

ALTER VIEW view ADD [IF NOT EXISTS] PARTITION spec;

CREATE VIEW [IF NOT EXISTS] [db_name.]view_name [(column_name [COMMENT column_comment], ...) ]
  [COMMENT view_comment]
  [TBLPROPERTIES (property_name = property_value, ...)]
  AS SELECT ...;
```

An exception is thrown when users issue any of these three DDL commands.

#### How was this patch tested?
Added test cases for parsing create view and changed the existing test cases to verify if the exceptions are thrown.

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12169 from gatorsmile/viewPartition.
2016-04-05 22:33:44 -07:00
Andrew Or adbfdb878d [SPARK-14128][SQL] Alter table DDL followup
## What changes were proposed in this pull request?

This is just a followup to #12121, which implemented the alter table DDLs using the `SessionCatalog`. Specially, this corrects the behavior of setting the location of a datasource table. For datasource tables, we need to set the `locationUri` in addition to the `path` entry in the serde properties. Additionally, changing the location of a datasource table partition is not allowed.

## How was this patch tested?

`DDLSuite`

Author: Andrew Or <andrew@databricks.com>

Closes #12186 from andrewor14/alter-table-ddl-followup.
2016-04-05 21:23:20 -07:00
Wenchen Fan f6456fa80b [SPARK-14296][SQL] whole stage codegen support for Dataset.map
## What changes were proposed in this pull request?

This PR adds a new operator `MapElements` for `Dataset.map`, it's a 1-1 mapping and is easier to adapt to whole stage codegen framework.

## How was this patch tested?

new test in `WholeStageCodegenSuite`

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12087 from cloud-fan/map.
2016-04-06 12:09:10 +08:00
Eric Liang 7d29c72f64 [SPARK-14359] Unit tests for java 8 lambda syntax with typed aggregates
## What changes were proposed in this pull request?

Adds unit tests for java 8 lambda syntax with typed aggregates as a follow-up to #12168

## How was this patch tested?

Unit tests.

Author: Eric Liang <ekl@databricks.com>

Closes #12181 from ericl/sc-2794-2.
2016-04-05 21:22:20 -05:00
Marcelo Vanzin d5ee9d5c24 [SPARK-529][SQL] Modify SQLConf to use new config API from core.
Because SQL keeps track of all known configs, some customization was
needed in SQLConf to allow that, since the core API does not have that
feature.

Tested via existing (and slightly updated) unit tests.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #11570 from vanzin/SPARK-529-sql.
2016-04-05 15:19:51 -07:00
Shixiong Zhu 7329fe272d [SPARK-14411][SQL] Add a note to warn that onQueryProgress is asynchronous
## What changes were proposed in this pull request?

onQueryProgress is asynchronous so the user may see some future status of `ContinuousQuery`. This PR just updated comments to warn it.

## How was this patch tested?

Only updated comments.

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12180 from zsxwing/ContinuousQueryListener-doc.
2016-04-05 15:18:35 -07:00
Andrew Or 45d8cdee39 [SPARK-14129][SPARK-14128][SQL] Alter table DDL commands
## What changes were proposed in this pull request?

In Spark 2.0, we want to handle the most common `ALTER TABLE` commands ourselves instead of passing the entire query text to Hive. This is done using the new `SessionCatalog` API introduced recently.

The commands supported in this patch include:
```
ALTER TABLE ... RENAME TO ...
ALTER TABLE ... SET TBLPROPERTIES ...
ALTER TABLE ... UNSET TBLPROPERTIES ...
ALTER TABLE ... SET LOCATION ...
ALTER TABLE ... SET SERDE ...
```
The commands we explicitly do not support are:
```
ALTER TABLE ... CLUSTERED BY ...
ALTER TABLE ... SKEWED BY ...
ALTER TABLE ... NOT CLUSTERED
ALTER TABLE ... NOT SORTED
ALTER TABLE ... NOT SKEWED
ALTER TABLE ... NOT STORED AS DIRECTORIES
```
For these we throw exceptions complaining that they are not supported.

## How was this patch tested?

`DDLSuite`

Author: Andrew Or <andrew@databricks.com>

Closes #12121 from andrewor14/alter-table-ddl.
2016-04-05 14:54:07 -07:00
Dongjoon Hyun c59abad052 [SPARK-14402][SQL] initcap UDF doesn't match Hive/Oracle behavior in lowercasing rest of string
## What changes were proposed in this pull request?

Current, SparkSQL `initCap` is using `toTitleCase` function. However, `UTF8String.toTitleCase` implementation changes only the first letter and just copy the other letters: e.g. sParK --> SParK. This is the correct implementation `toTitleCase`.
```
hive> select initcap('sParK');
Spark
```
```
scala> sql("select initcap('sParK')").head
res0: org.apache.spark.sql.Row = [SParK]
```

This PR updates the implementation of `initcap` using `toLowerCase` and `toTitleCase`.

## How was this patch tested?

Pass the Jenkins tests (including new testcase).

Author: Dongjoon Hyun <dongjoon@apache.org>

Closes #12175 from dongjoon-hyun/SPARK-14402.
2016-04-05 13:31:00 -07:00
Burak Yavuz 9ee5c25717 [SPARK-14353] Dataset Time Window window API for Python, and SQL
## What changes were proposed in this pull request?

The `window` function was added to Dataset with [this PR](https://github.com/apache/spark/pull/12008).
This PR adds the Python, and SQL, API for this function.

With this PR, SQL, Java, and Scala will share the same APIs as in users can use:
 - `window(timeColumn, windowDuration)`
 - `window(timeColumn, windowDuration, slideDuration)`
 - `window(timeColumn, windowDuration, slideDuration, startTime)`

In Python, users can access all APIs above, but in addition they can do
 - In Python:
   `window(timeColumn, windowDuration, startTime=...)`

that is, they can provide the startTime without providing the `slideDuration`. In this case, we will generate tumbling windows.

## How was this patch tested?

Unit tests + manual tests

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #12136 from brkyvz/python-windows.
2016-04-05 13:18:39 -07:00
Yin Huai 72544d6f2a [SPARK-14123][SPARK-14384][SQL] Handle CreateFunction/DropFunction
## What changes were proposed in this pull request?
This PR implements CreateFunction and DropFunction commands. Besides implementing these two commands, we also change how to manage functions. Here are the main changes.
* `FunctionRegistry` will be a container to store all functions builders and it will not actively load any functions. Because of this change, we do not need to maintain a separate registry for HiveContext. So, `HiveFunctionRegistry` is deleted.
* SessionCatalog takes care the job of loading a function if this function is not in the `FunctionRegistry` but its metadata is stored in the external catalog. For this case, SessionCatalog will (1) load the metadata from the external catalog, (2) load all needed resources (i.e. jars and files), (3) create a function builder based on the function definition, (4) register the function builder in the `FunctionRegistry`.
* A `UnresolvedGenerator` is created. So, the parser will not need to call `FunctionRegistry` directly during parsing, which is not a good time to create a Hive UDTF. In the analysis phase, we will resolve `UnresolvedGenerator`.

This PR is based on viirya's https://github.com/apache/spark/pull/12036/

## How was this patch tested?
Existing tests and new tests.

## TODOs
[x] Self-review
[x] Cleanup
[x] More tests for create/drop functions (we need to more tests for permanent functions).
[ ] File JIRAs for all TODOs
[x] Standardize the error message when a function does not exist.

Author: Yin Huai <yhuai@databricks.com>
Author: Liang-Chi Hsieh <simonh@tw.ibm.com>

Closes #12117 from yhuai/function.
2016-04-05 12:27:06 -07:00
Shixiong Zhu 463bac0011 [SPARK-14257][SQL] Allow multiple continuous queries to be started from the same DataFrame
## What changes were proposed in this pull request?

Make StreamingRelation store the closure to create the source in StreamExecution so that we can start multiple continuous queries from the same DataFrame.

## How was this patch tested?

`test("DataFrame reuse")`

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #12049 from zsxwing/df-reuse.
2016-04-05 11:12:05 -07:00
Wenchen Fan f77f11c671 [SPARK-14345][SQL] Decouple deserializer expression resolution from ObjectOperator
## What changes were proposed in this pull request?

This PR decouples deserializer expression resolution from `ObjectOperator`, so that we can use deserializer expression in normal operators. This is needed by #12061 and #12067 , I abstracted the logic out and put them in this PR to reduce code change in the future.

## How was this patch tested?

existing tests.

Author: Wenchen Fan <wenchen@databricks.com>

Closes #12131 from cloud-fan/separate.
2016-04-05 10:53:54 -07:00
gatorsmile 7807173679 [SPARK-14349][SQL] Issue Error Messages for Unsupported Operators/DML/DDL in SQL Context.
#### What changes were proposed in this pull request?

Currently, the weird error messages are issued if we use Hive Context-only operations in SQL Context.

For example,
- When calling `Drop Table` in SQL Context, we got the following message:
```
Expected exception org.apache.spark.sql.catalyst.parser.ParseException to be thrown, but java.lang.ClassCastException was thrown.
```

- When calling `Script Transform` in SQL Context, we got the message:
```
assertion failed: No plan for ScriptTransformation [key#9,value#10], cat, [tKey#155,tValue#156], null
+- LogicalRDD [key#9,value#10], MapPartitionsRDD[3] at beforeAll at BeforeAndAfterAll.scala:187
```

Updates:
Based on the investigation from hvanhovell , the root cause is `visitChildren`, which is the default implementation. It always returns the result of the last defined context child. After merging the code changes from hvanhovell , it works! Thank you hvanhovell !

#### How was this patch tested?
A few test cases are added.

Not sure if the same issue exist for the other operators/DDL/DML. hvanhovell

Author: gatorsmile <gatorsmile@gmail.com>
Author: xiaoli <lixiao1983@gmail.com>
Author: Herman van Hovell <hvanhovell@questtec.nl>
Author: Xiao Li <xiaoli@Xiaos-MacBook-Pro.local>

Closes #12134 from gatorsmile/hiveParserCommand.
2016-04-05 11:19:46 +02:00
Dilip Biswal 2715bc68bd [SPARK-14348][SQL] Support native execution of SHOW TBLPROPERTIES command
## What changes were proposed in this pull request?

This PR adds Native execution of SHOW TBLPROPERTIES command.

Command Syntax:
``` SQL
SHOW TBLPROPERTIES table_name[(property_key_literal)]
```
## How was this patch tested?

Tests added in HiveComandSuiie and DDLCommandSuite

Author: Dilip Biswal <dbiswal@us.ibm.com>

Closes #12133 from dilipbiswal/dkb_show_tblproperties.
2016-04-05 08:41:59 +02:00
Eric Liang 064623014e [SPARK-14359] Create built-in functions for typed aggregates in Java
## What changes were proposed in this pull request?

This adds the corresponding Java static functions for built-in typed aggregates already exposed in Scala.

## How was this patch tested?

Unit tests.

rxin

Author: Eric Liang <ekl@databricks.com>

Closes #12168 from ericl/sc-2794.
2016-04-05 00:30:55 -05:00
Burak Yavuz ba24d1ee9a [SPARK-14287] isStreaming method for Dataset
With the addition of StreamExecution (ContinuousQuery) to Datasets, data will become unbounded. With unbounded data, the execution of some methods and operations will not make sense, e.g. `Dataset.count()`.

A simple API is required to check whether the data in a Dataset is bounded or unbounded. This will allow users to check whether their Dataset is in streaming mode or not. ML algorithms may check if the data is unbounded and throw an exception for example.

The implementation of this method is simple, however naming it is the challenge. Some possible names for this method are:
 - isStreaming
 - isContinuous
 - isBounded
 - isUnbounded

I've gone with `isStreaming` for now. We can change it before Spark 2.0 if we decide to come up with a different name. For that reason I've marked it as `Experimental`

Author: Burak Yavuz <brkyvz@gmail.com>

Closes #12080 from brkyvz/is-streaming.
2016-04-04 19:04:09 -07:00
Marcelo Vanzin 24d7d2e453 [SPARK-13579][BUILD] Stop building the main Spark assembly.
This change modifies the "assembly/" module to just copy needed
dependencies to its build directory, and modifies the packaging
script to pick those up (and remove duplicate jars packages in the
examples module).

I also made some minor adjustments to dependencies to remove some
test jars from the final packaging, and remove jars that conflict with each
other when packaged separately (e.g. servlet api).

Also note that this change restores guava in applications' classpaths, even
though it's still shaded inside Spark. This is now needed for the Hadoop
libraries that are packaged with Spark, which now are not processed by
the shade plugin.

Author: Marcelo Vanzin <vanzin@cloudera.com>

Closes #11796 from vanzin/SPARK-13579.
2016-04-04 16:52:22 -07:00
Davies Liu 400b2f863f [SPARK-14259] [SQL] Merging small files together based on the cost of opening
## What changes were proposed in this pull request?

This PR basically re-do the things in #12068 but with a different model, which should work better in case of small files with different sizes.

## How was this patch tested?

Updated existing tests.

Ran a query on thousands of partitioned small files locally, with all default settings (the cost to open a file should be over estimated), the durations of tasks become smaller and smaller, which is good (the last few tasks will be shortest).

Author: Davies Liu <davies@databricks.com>

Closes #12095 from davies/file_cost.
2016-04-04 14:41:03 -07:00
Davies Liu cc70f17416 [SPARK-14334] [SQL] add toLocalIterator for Dataset/DataFrame
## What changes were proposed in this pull request?

RDD.toLocalIterator() could be used to fetch one partition at a time to reduce the memory usage. Right now, for Dataset/Dataframe we have to use df.rdd.toLocalIterator, which is super slow also requires lots of memory (because of the Java serializer or even Kyro serializer).

This PR introduce an optimized toLocalIterator for Dataset/DataFrame, which is much faster and requires much less memory. For a partition with 5 millions rows, `df.rdd.toIterator` took about 100 seconds, but df.toIterator took less than 7 seconds. For 10 millions row, rdd.toIterator will crash (not enough memory) with 4G heap, but df.toLocalIterator could finished in 12 seconds.

The JDBC server has been updated to use DataFrame.toIterator.

## How was this patch tested?

Existing tests.

Author: Davies Liu <davies@databricks.com>

Closes #12114 from davies/local_iterator.
2016-04-04 13:31:44 -07:00
Davies Liu 5743c6476d [SPARK-12981] [SQL] extract Pyhton UDF in physical plan
## What changes were proposed in this pull request?

Currently we extract Python UDFs into a special logical plan EvaluatePython in analyzer, But EvaluatePython is not part of catalyst, many rules have no knowledge of it , which will break many things (for example, filter push down or column pruning).

We should treat Python UDFs as normal expressions, until we want to evaluate in physical plan, we could extract them in end of optimizer, or physical plan.

This PR extract Python UDFs in physical plan.

Closes #10935

## How was this patch tested?

Added regression tests.

Author: Davies Liu <davies@databricks.com>

Closes #12127 from davies/py_udf.
2016-04-04 10:56:26 -07:00
Shixiong Zhu 855ed44ed3 [SPARK-14176][SQL] Add DataFrameWriter.trigger to set the stream batch period
## What changes were proposed in this pull request?

Add a processing time trigger to control the batch processing speed

## How was this patch tested?

Unit tests

Author: Shixiong Zhu <shixiong@databricks.com>

Closes #11976 from zsxwing/trigger.
2016-04-04 10:54:06 -07:00