Commit graph

685 commits

Author SHA1 Message Date
Ali Smesseim 8b0a54e6ff [SPARK-32057][SQL][TEST-HIVE1.2][TEST-HADOOP2.7] ExecuteStatement: cancel and close should not transiently ERROR
### What changes were proposed in this pull request?
#28671 introduced a change where the order in which CANCELED state for SparkExecuteStatementOperation is set was changed. Before setting the state to CANCELED, `cleanup()` was called which kills the jobs, causing an exception to be thrown inside `execute()`. This causes the state to transiently become ERROR before being set to CANCELED. This PR fixes the order.

### Why are the changes needed?
Bug: wrong operation state is set.

### Does this PR introduce _any_ user-facing change?
No.

### How was this patch tested?
Unit test in SparkExecuteStatementOperationSuite.scala.

Closes #28912 from alismess-db/execute-statement-operation-cleanup-order.

Authored-by: Ali Smesseim <ali.smesseim@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-07-08 09:28:16 +09:00
Kent Yao abc8ccc37b [SPARK-31926][SQL][TESTS][FOLLOWUP][TEST-HIVE1.2][TEST-MAVEN] Fix concurrency issue for ThriftCLIService to getPortNumber
### What changes were proposed in this pull request?

This PR brings https://github.com/apache/spark/pull/28751 back

- It once reverted by 4a25200 because of inevitable maven test failure
    - See related updates in this followup a0187cd6b5

- And reverted again because of the flakiness of the added unit tests
   - In this PR, The flakiness reason found is caused by the hive metastore connection that the SparkSQLCLIService trying to create which turns out is unnecessary at all. This metastore client points to a dummy metastore server only.
   - Also, add some cleanups for SharedThriftServer trait in before and after to prevent its configurations being polluted or polluting others

### Why are the changes needed?

fix flaky test

### Does this PR introduce _any_ user-facing change?

no

### How was this patch tested?

passing sbt and maven tests

Closes #28835 from yaooqinn/SPARK-31926-F.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-06-19 05:58:54 +00:00
Dongjoon Hyun 75afd88904 Revert "[SPARK-31926][SQL][TEST-HIVE1.2][TEST-MAVEN] Fix concurrency issue for ThriftCLIService to getPortNumber"
This reverts commit a0187cd6b5.
2020-06-15 19:04:23 -07:00
Kent Yao a0187cd6b5 [SPARK-31926][SQL][TEST-HIVE1.2][TEST-MAVEN] Fix concurrency issue for ThriftCLIService to getPortNumber
### What changes were proposed in this pull request?

This PR brings 02f32cfae4 back which reverted by 4a25200cd7 because of maven test failure

diffs newly made:
1. add a missing log4j file to test resources
2. Call `SessionState.detachSession()` to clean the thread local one in `afterAll`.
3. Not use dedicated JVMs for sbt test runner too

### Why are the changes needed?

fix the maven test

### Does this PR introduce _any_ user-facing change?

no

### How was this patch tested?

add new tests

Closes #28797 from yaooqinn/SPARK-31926-NEW.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-06-15 06:10:24 +00:00
Kousuke Saruta 610acb2fe4 [SPARK-31644][BUILD][FOLLOWUP] Make Spark's guava version configurable from the command line for sbt
### What changes were proposed in this pull request?

This PR proposes to support guava version configurable from command line for sbt.

### Why are the changes needed?

#28455 added the configurability for Maven but not for sbt.
sbt is usually faster than Maven so it's useful for developers.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

I confirmed the guava version is changed with the following commands.
```
 $ build/sbt "inspect tree clean"  | grep guava
[info]       +-spark/*:dependencyOverrides = Set(com.google.guava:guava:14.0.1, xerces:xercesImpl:2.12.0, jline:jline:2.14.6, org.apache.avro:avro:1.8.2)
```
```
$ build/sbt -Dguava.version=25.0-jre "inspect tree clean"  | grep guava
[info]       +-spark/*:dependencyOverrides = Set(com.google.guava:guava:25.0-jre, xerces:xercesImpl:2.12.0, jline:jline:2.14.6, org.apache.avro:avro:1.8.2)
```

Closes #28822 from sarutak/guava-version-for-sbt.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-06-13 19:04:33 -07:00
Dongjoon Hyun 4a25200cd7 Revert "[SPARK-31926][SQL][TEST-HIVE1.2] Fix concurrency issue for ThriftCLIService to getPortNumber"
This reverts commit 02f32cfae4.
2020-06-10 17:21:03 -07:00
Kent Yao 02f32cfae4 [SPARK-31926][SQL][TEST-HIVE1.2] Fix concurrency issue for ThriftCLIService to getPortNumber
### What changes were proposed in this pull request?

When` org.apache.spark.sql.hive.thriftserver.HiveThriftServer2#startWithContext` called,
it starts `ThriftCLIService` in the background with a new Thread, at the same time we call `ThriftCLIService.getPortNumber,` we might not get the bound port if it's configured with 0.

This PR moves the  TServer/HttpServer initialization code out of that new Thread.

### Why are the changes needed?

Fix concurrency issue, improve test robustness.

### Does this PR introduce _any_ user-facing change?

NO
### How was this patch tested?

add new tests

Closes #28751 from yaooqinn/SPARK-31926.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-06-09 16:49:40 +00:00
Kousuke Saruta d3eba5bc8c
[SPARK-31756][WEBUI] Add real headless browser support for UI test
### What changes were proposed in this pull request?

This PR mainly adds two things.

1. Real headless browser support for UI test
2. A test suite using headless Chrome as one instance of  those browsers.

Also, for environment where Chrome and Chrome driver is not installed, `ChromeUITest` tag is added to filter out the test suite.
By default, test suites with `ChromeUITest` is disabled.

### Why are the changes needed?

In the current master, there are two problems for UI test.
1. Lots of tests especially JavaScript related ones are done manually.
Appearance is better to be confirmed by our eyes but logic should be tested by test cases ideally.

2. Compared to the real web browsers, HtmlUnit doesn't seem to support JavaScript enough.
I added a JavaScript related test before for SPARK-31534 using HtmlUnit which is simple library based headless browser for test.
The test I added works somehow but some JavaScript related error is shown in unit-tests.log.

```
======= EXCEPTION START ========
Exception class=[net.sourceforge.htmlunit.corejs.javascript.JavaScriptException]
com.gargoylesoftware.htmlunit.ScriptException: Error: TOOLTIP: Option "sanitizeFn" provided type "window" but expected type "(null|function)". (http://192.168.1.209:60724/static/jquery-3.4.1.min.js#2)
        at com.gargoylesoftware.htmlunit.javascript.JavaScriptEngine$HtmlUnitContextAction.run(JavaScriptEngine.java:904)
        at net.sourceforge.htmlunit.corejs.javascript.Context.call(Context.java:628)
        at net.sourceforge.htmlunit.corejs.javascript.ContextFactory.call(ContextFactory.java:515)
        at com.gargoylesoftware.htmlunit.javascript.JavaScriptEngine.callFunction(JavaScriptEngine.java:835)
        at com.gargoylesoftware.htmlunit.javascript.JavaScriptEngine.callFunction(JavaScriptEngine.java:807)
        at com.gargoylesoftware.htmlunit.InteractivePage.executeJavaScriptFunctionIfPossible(InteractivePage.java:216)
        at com.gargoylesoftware.htmlunit.javascript.background.JavaScriptFunctionJob.runJavaScript(JavaScriptFunctionJob.java:52)
        at com.gargoylesoftware.htmlunit.javascript.background.JavaScriptExecutionJob.run(JavaScriptExecutionJob.java:102)
        at com.gargoylesoftware.htmlunit.javascript.background.JavaScriptJobManagerImpl.runSingleJob(JavaScriptJobManagerImpl.java:426)
        at com.gargoylesoftware.htmlunit.javascript.background.DefaultJavaScriptExecutor.run(DefaultJavaScriptExecutor.java:157)
        at java.lang.Thread.run(Thread.java:748)
Caused by: net.sourceforge.htmlunit.corejs.javascript.JavaScriptException: Error: TOOLTIP: Option "sanitizeFn" provided type "window" but expected type "(null|function)". (http://192.168.1.209:60724/static/jquery-3.4.1.min.js#2)
        at net.sourceforge.htmlunit.corejs.javascript.Interpreter.interpretLoop(Interpreter.java:1009)
        at net.sourceforge.htmlunit.corejs.javascript.Interpreter.interpret(Interpreter.java:800)
        at net.sourceforge.htmlunit.corejs.javascript.InterpretedFunction.call(InterpretedFunction.java:105)
        at net.sourceforge.htmlunit.corejs.javascript.ContextFactory.doTopCall(ContextFactory.java:413)
        at com.gargoylesoftware.htmlunit.javascript.HtmlUnitContextFactory.doTopCall(HtmlUnitContextFactory.java:252)
        at net.sourceforge.htmlunit.corejs.javascript.ScriptRuntime.doTopCall(ScriptRuntime.java:3264)
        at com.gargoylesoftware.htmlunit.javascript.JavaScriptEngine$4.doRun(JavaScriptEngine.java:828)
        at com.gargoylesoftware.htmlunit.javascript.JavaScriptEngine$HtmlUnitContextAction.run(JavaScriptEngine.java:889)
        ... 10 more
JavaScriptException value = Error: TOOLTIP: Option "sanitizeFn" provided type "window" but expected type "(null|function)".
== CALLING JAVASCRIPT ==
  function () {
      throw e;
  }
======= EXCEPTION END ========
```
I tried to upgrade HtmlUnit to 2.40.0 but what is worse, the test become not working even though it works on real browsers like Chrome, Safari and Firefox without error.
```
[info] UISeleniumSuite:
[info] - SPARK-31534: text for tooltip should be escaped *** FAILED *** (17 seconds, 745 milliseconds)
[info]   The code passed to eventually never returned normally. Attempted 2 times over 12.910785232 seconds. Last failure message: com.gargoylesoftware.htmlunit.ScriptException: ReferenceError: Assignment to undefined "regeneratorRuntime" in strict mode (http://192.168.1.209:62132/static/vis-timeline-graph2d.min.js#52(Function)#1)
```
To resolve those problems, it's better to support headless browser for UI test.

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

I tested with following patterns. Both Chrome and Chrome driver should be installed to test.

1. sbt / with default excluded tags (ChromeUISeleniumSuite is expected to be skipped and SQLQueryTestSuite is expected to succeed)
`build/sbt -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver "testOnly org.apache.spark.ui.ChromeUISeleniumSuite org.apache.spark.sql.SQLQueryTestSuite"

2. sbt / overwrite default excluded tags as empty string (Both suites are expected to succeed)
`build/sbt -Dtest.default.exclude.tags= -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver "testOnly org.apache.spark.ui.ChromeUISeleniumSuite org.apache.spark.sql.SQLQueryTestSuite"

3. sbt / set `test.exclude.tags` to `org.apache.spark.tags.ExtendedSQLTest` (Both suites are expected to be skipped)
`build/sbt -Dtest.exclude.tags=org.apache.spark.tags.ExtendedSQLTest -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver "testOnly org.apache.spark.ui.ChromeUISeleniumSuite org.apache.spark.sql.SQLQueryTestSuite"

4. Maven / with default excluded tags (ChromeUISeleniumSuite is expected to be skipped and SQLQueryTestSuite is expected to succeed)
`build/mvn -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver -Dtest=none -DwildcardSuites=org.apache.spark.ui.ChromeUISeleniumSuite,org.apache.spark.sql.SQLQueryTestSuite test`

5. Maven / overwrite default excluded tags as empty string (Both suites are expected to succeed)
`build/mvn -Dtest.default.exclude.tags= -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver -Dtest=none -DwildcardSuites=org.apache.spark.ui.ChromeUISeleniumSuite,org.apache.spark.sql.SQLQueryTestSuite test`

6. Maven / set `test.exclude.tags` to `org.apache.spark.tags.ExtendedSQLTest` (Both suites are expected to be skipped)
`build/mvn -Dtest.exclude.tags=org.apache.spark.tags.ExtendedSQLTest  -Dspark.test.webdriver.chrome.driver=/path/to/chromedriver -Dtest=none -DwildcardSuites=org.apache.spark.ui.ChromeUISeleniumSuite,org.apache.spark.sql.SQLQueryTestSuite test`

Closes #28627 from sarutak/real-headless-browser-support-take2.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-05-29 10:41:29 -07:00
Dongjoon Hyun 625abca9db [SPARK-31858][BUILD] Upgrade commons-io to 2.5 in Hadoop 3.2 profile
### What changes were proposed in this pull request?

This PR aims to upgrade `commons-io` from 2.4 to 2.5 for Apache Spark 3.1.

### Why are the changes needed?

Since Hadoop 3.1, `commons-io` 2.5 is used.
- https://issues.apache.org/jira/browse/HADOOP-15261

### Does this PR introduce _any_ user-facing change?

No.

### How was this patch tested?

Pass the Jenkins with Hadoop-3.2 profile.

Maven dependency is verified via `test-dependencies.sh` automatically. SBT dependency can be verified like the following manually.
```
build/sbt -Phadoop-3.2 "core/dependencyTree" | grep commons-io:commons-io | head -n1
[info]   | | +-commons-io:commons-io:2.5
```

Closes #28665 from dongjoon-hyun/SPARK-31858.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-05-29 07:46:53 -07:00
Dongjoon Hyun 6180028a37 [SPARK-31547][BUILD] Upgrade Genjavadoc to 0.16
### What changes were proposed in this pull request?

This PR aims to upgrade Genjavadoc to 0.16.

### Why are the changes needed?

Although we skipped Scala 2.12.11, this brings 2.12.11 official support and better 2.12.12 compatibility.

- https://github.com/lightbend/genjavadoc/commits/v0.16

### Does this PR introduce any user-facing change?

No. (The generated doc is the same)

### How was this patch tested?

Build with 0.15 and 0.16.
```
$ SKIP_PYTHONDOC=1 SKIP_RDOC=1 SKIP_SQLDOC=1 jekyll build
```

Compare the result. The generated doc is identical.
```
$ diff -r _site_0.15 _site_0.16 | grep -v '^diff -r' | grep -v 'Generated by javadoc' | sort | uniq
---
5c5
```

Closes #28321 from dongjoon-hyun/SPARK-31547.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Kousuke Saruta <sarutak@oss.nttdata.com>
2020-04-24 12:13:10 +09:00
Kent Yao 336621e277 [SPARK-31258][BUILD] Pin the avro version in SBT
### What changes were proposed in this pull request?

add arvo dep in SparkBuild

### Why are the changes needed?
fix sbt unidoc like https://github.com/apache/spark/pull/28017#issuecomment-603828597
```scala
[warn] Multiple main classes detected.  Run 'show discoveredMainClasses' to see the list
[warn] Multiple main classes detected.  Run 'show discoveredMainClasses' to see the list
[info] Main Scala API documentation to /home/jenkins/workspace/SparkPullRequestBuilder6/target/scala-2.12/unidoc...
[info] Main Java API documentation to /home/jenkins/workspace/SparkPullRequestBuilder6/target/javaunidoc...
[error] /home/jenkins/workspace/SparkPullRequestBuilder6/core/src/main/scala/org/apache/spark/serializer/GenericAvroSerializer.scala:123: value createDatumWriter is not a member of org.apache.avro.generic.GenericData
[error]     writerCache.getOrElseUpdate(schema, GenericData.get.createDatumWriter(schema))
[error]                                                         ^
[info] No documentation generated with unsuccessful compiler run
[error] one error found
```

### Does this PR introduce any user-facing change?

no
### How was this patch tested?

pass jenkins
and verify manually with `sbt dependencyTree`
```scala
 kentyaohulk  ~/spark   dep  build/sbt dependencyTree | grep avro | grep -v Resolving
[info]   +-org.apache.avro:avro-mapred:1.8.2
[info]   | +-org.apache.avro:avro-ipc:1.8.2
[info]   | | +-org.apache.avro:avro:1.8.2
[info]   +-org.apache.avro:avro:1.8.2
[info]   | | +-org.apache.avro:avro:1.8.2
[info] org.apache.spark:spark-avro_2.12:3.1.0-SNAPSHOT [S]
[info]   | | | +-org.apache.avro:avro-mapred:1.8.2
[info]   | | | | +-org.apache.avro:avro-ipc:1.8.2
[info]   | | | | | +-org.apache.avro:avro:1.8.2
[info]   | | | +-org.apache.avro:avro:1.8.2
[info]   | | | | | +-org.apache.avro:avro:1.8.2
```

Closes #28020 from yaooqinn/dep.

Authored-by: Kent Yao <yaooqinn@hotmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-03-26 10:48:11 +09:00
Gabor Somogyi bf342bafa8
[SPARK-30541][TESTS] Implement KafkaDelegationTokenSuite with testRetry
### What changes were proposed in this pull request?
`KafkaDelegationTokenSuite` has been ignored because showed flaky behaviour. In this PR I've changed the approach how the test executed and turning it on again. This PR contains the following:
* The test runs in separate JVM in order to avoid modified security context
* The body of the test runs in `testRetry` which reties if failed
* Additional logs to analyse possible failures
* Enhanced clean-up code

### Why are the changes needed?
`KafkaDelegationTokenSuite ` is ignored.

### Does this PR introduce any user-facing change?
No.

### How was this patch tested?
Executed the test in loop 1k+ times in jenkins (locally much harder to reproduce).

Closes #27877 from gaborgsomogyi/SPARK-30541.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-03-21 18:59:29 -07:00
Prashant Sharma 3b6da36cd6 [SPARK-31120][BUILD] Support enabling maven profiles for importing vi…
…a sbt on Intellij IDEA.

### What changes were proposed in this pull request?
Read from java property "sbt.maven.profiles", the maven profiles to be enabled while importing to intellij IDEA via SBT.

### Why are the changes needed?
Without this change one needs to set an os-wide environment variable `SBT_MAVEN_PROFILES`, on mac it is even trickier (I have not figured out, what can be done).

### Does this PR introduce any user-facing change?
None

### How was this patch tested?
Manually tested by applying multiple profiles or a single profile.
Please see the attached images to see the steps.
<img width="802" alt="Screenshot 2020-03-11 at 4 09 57 PM" src="https://user-images.githubusercontent.com/992952/76411667-46223280-63b8-11ea-9a77-dc014b66d48b.png">
<img width="867" alt="Screenshot 2020-03-11 at 4 18 09 PM" src="https://user-images.githubusercontent.com/992952/76411676-4ae6e680-63b8-11ea-895d-ed9d6cc223c5.png">

Closes #27878 from ScrapCodes/SPARK-31120/idea-load-maven-profiles.

Authored-by: Prashant Sharma <prashsh1@in.ibm.com>
Signed-off-by: Sean Owen <srowen@gmail.com>
2020-03-15 12:39:46 -05:00
Dongjoon Hyun 972e23d181
[SPARK-31130][BUILD] Use the same version of commons-io in SBT
### What changes were proposed in this pull request?

This PR (SPARK-31130) aims to pin `Commons IO` version to `2.4` in SBT build like Maven build.

### Why are the changes needed?

[HADOOP-15261](https://issues.apache.org/jira/browse/HADOOP-15261) upgraded `commons-io` from 2.4 to 2.5 at Apache Hadoop 3.1.

In `Maven`, Apache Spark always uses `Commons IO 2.4` based on `pom.xml`.
```
$ git grep commons-io.version
pom.xml:    <commons-io.version>2.4</commons-io.version>
pom.xml:        <version>${commons-io.version}</version>
```

However, `SBT` choose `2.5`.

**branch-3.0**
```
$ build/sbt -Phadoop-3.2 "core/dependencyTree" | grep commons-io:commons-io | head -n1
[info]   | | +-commons-io:commons-io:2.5
```

**branch-2.4**
```
$ build/sbt -Phadoop-3.1 "core/dependencyTree" | grep commons-io:commons-io | head -n1
[info]   | | +-commons-io:commons-io:2.5
```

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Pass the Jenkins with `[test-hadoop3.2]` (the default PR Builder is `SBT`) and manually do the following locally.
```
build/sbt -Phadoop-3.2 "core/dependencyTree" | grep commons-io:commons-io | head -n1
```

Closes #27886 from dongjoon-hyun/SPARK-31130.

Authored-by: Dongjoon Hyun <dongjoon@apache.org>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2020-03-12 09:06:29 -07:00
HyukjinKwon 5b3277f4fc [SPARK-30994][BUILD][FOLLOW-UP] Change scope of xml-apis to include it and add xerces in SBT as dependency override
### What changes were proposed in this pull request?

This PR propose

1. Explicitly include xml-apis. xml-apis is already the part of xerces 2.12.0 (https://repo1.maven.org/maven2/xerces/xercesImpl/2.12.0/xercesImpl-2.12.0.pom). However, we're excluding it by setting `scope` to `test`. This seems causing `spark-shell`, built from Maven, to fail.

    Seems like previously xml-apis wasn't reached for some reasons but after we upgrade, it seems requiring. Therefore, this PR proposes to include it.

2. Pins `xerces` version in SBT as well. Seems this dependency is resolved differently from Maven.

Note that Hadoop 3 does not looks requiring this as they replaced xerces as of [HDFS-12221](https://issues.apache.org/jira/browse/HDFS-12221).

### Why are the changes needed?

To make `spark-shell` working from Maven build, and uses the same xerces version.

### Does this PR introduce any user-facing change?

No, it's master only.

### How was this patch tested?

**1.**

```bash
./build/mvn -DskipTests -Psparkr -Phive clean package
./bin/spark-shell
```

Before:

```
Exception in thread "main" java.lang.NoClassDefFoundError: org/w3c/dom/ElementTraversal
	at java.lang.ClassLoader.defineClass1(Native Method)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
	at java.net.URLClassLoader.defineClass(URLClassLoader.java:468)
	at java.net.URLClassLoader.access$100(URLClassLoader.java:74)
	at java.net.URLClassLoader$1.run(URLClassLoader.java:369)
	at java.net.URLClassLoader$1.run(URLClassLoader.java:363)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:362)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
	at org.apache.xerces.parsers.AbstractDOMParser.startDocument(Unknown Source)
	at org.apache.xerces.xinclude.XIncludeHandler.startDocument(Unknown Source)
	at org.apache.xerces.impl.dtd.XMLDTDValidator.startDocument(Unknown Source)
	at org.apache.xerces.impl.XMLDocumentScannerImpl.startEntity(Unknown Source)
	at org.apache.xerces.impl.XMLVersionDetector.startDocumentParsing(Unknown Source)
	at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
	at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
	at org.apache.xerces.parsers.XMLParser.parse(Unknown Source)
	at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
	at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
	at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:150)
	at org.apache.hadoop.conf.Configuration.parse(Configuration.java:2482)
	at org.apache.hadoop.conf.Configuration.parse(Configuration.java:2470)
	at org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2541)
	at org.apache.hadoop.conf.Configuration.loadResources(Configuration.java:2494)
	at org.apache.hadoop.conf.Configuration.getProps(Configuration.java:2407)
	at org.apache.hadoop.conf.Configuration.set(Configuration.java:1143)
	at org.apache.hadoop.conf.Configuration.set(Configuration.java:1115)
	at org.apache.spark.deploy.SparkHadoopUtil$.org$apache$spark$deploy$SparkHadoopUtil$$appendS3AndSparkHadoopHiveConfigurations(SparkHadoopUtil.scala:456)
	at org.apache.spark.deploy.SparkHadoopUtil$.newConfiguration(SparkHadoopUtil.scala:427)
	at org.apache.spark.deploy.SparkSubmit.$anonfun$prepareSubmitEnvironment$2(SparkSubmit.scala:342)
	at scala.Option.getOrElse(Option.scala:189)
	at org.apache.spark.deploy.SparkSubmit.prepareSubmitEnvironment(SparkSubmit.scala:342)
	at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:871)
	at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
	at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
	at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
	at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1007)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1016)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.ClassNotFoundException: org.w3c.dom.ElementTraversal
	at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
	... 42 more
```

After:

```
...
Welcome to
      ____              __
     / __/__  ___ _____/ /__
    _\ \/ _ \/ _ `/ __/  '_/
   /___/ .__/\_,_/_/ /_/\_\   version 3.1.0-SNAPSHOT
      /_/

Using Scala version 2.12.10 (Java HotSpot(TM) 64-Bit Server VM, Java 1.8.0_202)
Type in expressions to have them evaluated.
Type :help for more information.

scala>
```

**2.**

```
./build/sbt dependencyTree -Phadoop-2.7 -Phive-2.3 -Phive-thriftserver -Phive
./build/sbt dependencyTree -Phadoop-3.2 -Phive-2.3 -Phive-thriftserver -Phive
```

Closes #27808 from HyukjinKwon/SPARK-30994.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-03-06 09:39:02 +09:00
Josh Rosen f152d2a0a8 [SPARK-30944][BUILD] Update URL for Google Cloud Storage mirror of Maven Central
### What changes were proposed in this pull request?

This PR is a followup to #27307: per https://travis-ci.community/t/maven-builds-that-use-the-gcs-maven-central-mirror-should-update-their-paths/5926, the Google Cloud Storage mirror of Maven Central has updated its URLs: the new paths are updated more frequently. The new paths are listed on https://storage-download.googleapis.com/maven-central/index.html

This patch updates our build files to use these new URLs.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Existing build + tests.

Closes #27688 from JoshRosen/update-gcs-mirror-url.

Authored-by: Josh Rosen <joshrosen@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-25 17:04:13 +09:00
Yuanjian Li a5efbb284e [SPARK-30809][SQL] Review and fix issues in SQL API docs
### What changes were proposed in this pull request?
- Add missing `since` annotation.
- Don't show classes under `org.apache.spark.sql.dynamicpruning` package in API docs.
- Fix the scope of `xxxExactNumeric` to remove it from the API docs.

### Why are the changes needed?
Avoid leaking APIs unintentionally in Spark 3.0.0.

### Does this PR introduce any user-facing change?
No. All these changes are to avoid leaking APIs unintentionally in Spark 3.0.0.

### How was this patch tested?
Manually generated the API docs and verified the above issues have been fixed.

Closes #27560 from xuanyuanking/SPARK-30809.

Authored-by: Yuanjian Li <xyliyuanjian@gmail.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2020-02-21 17:03:22 +08:00
HyukjinKwon 2bc765a831 [SPARK-30756][SQL] Fix ThriftServerWithSparkContextSuite on spark-branch-3.0-test-sbt-hadoop-2.7-hive-2.3
### What changes were proposed in this pull request?

This PR tries #26710 (comment) way to fix the test.

### Why are the changes needed?

To make the tests pass.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Jenkins will test first, and then `on spark-branch-3.0-test-sbt-hadoop-2.7-hive-2.3` will test it out.

Closes #27513 from HyukjinKwon/test-SPARK-30756.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
(cherry picked from commit 8efe367a4e)
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-02-11 15:50:16 +09:00
Shixiong Zhu e2ebca733c [SPARK-30779][SS] Fix some API issues found when reviewing Structured Streaming API docs
### What changes were proposed in this pull request?

- Fix the scope of `Logging.initializeForcefully` so that it doesn't appear in subclasses' public methods. Right now, `sc.initializeForcefully(false, false)` is allowed to called.
- Don't show classes under `org.apache.spark.internal` package in API docs.
- Add missing `since` annotation.
- Fix the scope of `ArrowUtils` to remove it from the API docs.

### Why are the changes needed?

Avoid leaking APIs unintentionally in Spark 3.0.0.

### Does this PR introduce any user-facing change?

No. All these changes are to avoid leaking APIs unintentionally in Spark 3.0.0.

### How was this patch tested?

Manually generated the API docs and verified the above issues have been fixed.

Closes #27528 from zsxwing/audit-ss-apis.

Authored-by: Shixiong Zhu <zsxwing@gmail.com>
Signed-off-by: Xiao Li <gatorsmile@gmail.com>
2020-02-10 14:26:14 -08:00
HyukjinKwon 6f4703e22e [SPARK-30690][DOCS][BUILD] Add CalendarInterval into API documentation
### What changes were proposed in this pull request?

We should also expose it in documentation as we marked it as unstable API as of SPARK-30547
Note that, seems Javadoc -> Scaladoc doesn't work but this PR does not target to fix.

### Why are the changes needed?

To show the documentation of API.

### Does this PR introduce any user-facing change?
No.

### How was this patch tested?
Manually built the docs via `jykill serve` under `docs` directory:

![Screen Shot 2020-01-31 at 4 04 15 PM](https://user-images.githubusercontent.com/6477701/73519315-12143300-4444-11ea-9260-070c9f672dde.png)

Closes #27412 from HyukjinKwon/SPARK-30547.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-01-31 22:50:01 +09:00
HyukjinKwon cd9ccdc0ac [SPARK-30601][BUILD] Add a Google Maven Central as a primary repository
### What changes were proposed in this pull request?

This PR proposes to address four things. Three issues and fixes were a bit mixed so this PR sorts it out. See also http://apache-spark-developers-list.1001551.n3.nabble.com/Adding-Maven-Central-mirror-from-Google-to-the-build-td28728.html for the discussion in the mailing list.

1. Add the Google Maven Central mirror (GCS) as a primary repository. This will not only help development more stable but also in order to make Github Actions build (where it is always required to download jars) stable. In case of Jenkins PR builder, it wouldn't be affected too much as it uses the pre-downloaded jars under `.m2`.

    - Google Maven Central seems stable for heavy workload but not synced very quickly (e.g., new release is missing)
    - Maven Central (default) seems less stable but synced quickly.

    We already added this GCS mirror as a default additional remote repository at SPARK-29175. So I don't see an issue to add it as a repo.
    abf759a91e/sql/catalyst/src/main/scala/org/apache/spark/sql/internal/SQLConf.scala (L2111-L2118)

2. Currently, we have the hard-corded repository in [`sbt-pom-reader`](https://github.com/JoshRosen/sbt-pom-reader/blob/v1.0.0-spark/src/main/scala/com/typesafe/sbt/pom/MavenPomResolver.scala#L32) and this seems overwriting Maven's existing resolver by the same ID `central` with `http://` when initially the pom file is ported into SBT instance. This uses `http://` which latently Maven Central disallowed (see https://github.com/apache/spark/pull/27242)

    My speculation is that we just need to be able to load plugin and let it convert POM to SBT instance with another fallback repo. After that, it _seems_ using `central` with `https` properly. See also https://github.com/apache/spark/pull/27307#issuecomment-576720395.

    I double checked that we use `https` properly from the SBT build as well:

    ```
    [debug] downloading https://repo1.maven.org/maven2/com/etsy/sbt-checkstyle-plugin_2.10_0.13/3.1.1/sbt-checkstyle-plugin-3.1.1.pom ...
    [debug] 	public: downloading https://repo1.maven.org/maven2/com/etsy/sbt-checkstyle-plugin_2.10_0.13/3.1.1/sbt-checkstyle-plugin-3.1.1.pom
    [debug] 	public: downloading https://repo1.maven.org/maven2/com/etsy/sbt-checkstyle-plugin_2.10_0.13/3.1.1/sbt-checkstyle-plugin-3.1.1.pom.sha1
    ```

    This was fixed by adding the same repo (https://github.com/apache/spark/pull/27281), `central_without_mirror`, which is a bit awkward. Instead, this PR adds GCS as a main repo, and community Maven central as a fallback repo. So, presumably the community Maven central repo is used when the plugin is loaded as a fallback.

3. While I am here, I fix another issue. Github Action at https://github.com/apache/spark/pull/27279 is being failed. The reason seems to be scalafmt 1.0.3 is in Maven central but not in GCS.

    ```
    org.apache.maven.plugin.PluginResolutionException: Plugin org.antipathy:mvn-scalafmt_2.12:1.0.3 or one of its dependencies could not be resolved: Could not find artifact org.antipathy:mvn-scalafmt_2.12🫙1.0.3 in google-maven-central (https://maven-central.storage-download.googleapis.com/repos/central/data/)
        at org.apache.maven.plugin.internal.DefaultPluginDependenciesResolver.resolve     (DefaultPluginDependenciesResolver.java:131)
    ```

   `mvn-scalafmt` exists in Maven central:

    ```bash
    $ curl https://repo.maven.apache.org/maven2/org/antipathy/mvn-scalafmt_2.12/1.0.3/mvn-scalafmt_2.12-1.0.3.pom
    ```

    ```xml
    <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
        <modelVersion>4.0.0</modelVersion>
        ...
    ```

    whereas not in GCS mirror:

    ```bash
    $ curl https://maven-central.storage-download.googleapis.com/repos/central/data/org/antipathy/mvn-scalafmt_2.12/1.0.3/mvn-scalafmt_2.12-1.0.3.pom
    ```
    ```xml
    <?xml version='1.0' encoding='UTF-8'?><Error><Code>NoSuchKey</Code><Message>The specified key does not exist.</Message><Details>No such object: maven-central/repos/central/data/org/antipathy/mvn-scalafmt_2.12/1.0.3/mvn-scalafmt_2.12-1.0.3.pom</Details></Error>%
    ```

    In this PR, simply make both repos accessible by adding to `pluginRepositories`.

4. Remove the workarounds in Github Actions to switch mirrors because now we have same repos in the same order (Google Maven Central first, and Maven Central second)

### Why are the changes needed?

To make the build and Github Action more stable.

### Does this PR introduce any user-facing change?

No, dev only change.

### How was this patch tested?

I roughly checked local and PR against my fork (https://github.com/HyukjinKwon/spark/pull/2 and https://github.com/HyukjinKwon/spark/pull/3).

Closes #27307 from HyukjinKwon/SPARK-30572.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2020-01-23 16:00:21 +09:00
Kousuke Saruta a3357dfcca [SPARK-30544][BUILD] Upgrade the version of Genjavadoc to 0.15
### What changes were proposed in this pull request?

Upgrade the version of Genjavadoc from 0.14 to 0.15.

### Why are the changes needed?

To enable to build for Scala 2.13.1.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

I confirmed there is no dependency error related to genjavadoc by manual build.
Also, I generated javadoc by `LANG=C build/sbt -Pkinesis-asl -Pyarn -Pkubernetes -Phive-thriftserver  unidoc` for both code with/without this change and did `diff -r` target/javadoc.

Closes #27255 from sarutak/upgrade-genjavadoc.

Authored-by: Kousuke Saruta <sarutak@oss.nttdata.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2020-01-18 00:15:49 -08:00
Sean Owen fac6b9bde8 Revert [SPARK-27300][GRAPH] Add Spark Graph modules and dependencies
This reverts commit 709387d660.

See https://issues.apache.org/jira/browse/SPARK-27300?focusedCommentId=16990048&page=com.atlassian.jira.plugin.system.issuetabpanels%3Acomment-tabpanel#comment-16990048 and previous mailing list discussions.

### What changes were proposed in this pull request?

Revert the addition of skeleton graph API modules for Spark 3.0.

### Why are the changes needed?

It does not appear that content will be added to the module for Spark 3, so I propose avoiding committing to the modules, which are no-ops now, in the upcoming major 3.0 release.

### Does this PR introduce any user-facing change?

No, the modules were not released.

### How was this patch tested?

Existing tests, but mostly N/A.

Closes #26928 from srowen/Revert27300.

Authored-by: Sean Owen <srowen@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-12-17 09:06:23 -08:00
HyukjinKwon a57bbf2ee0 [SPARK-30164][TESTS][DOCS] Exclude Hive domain in Unidoc build explicitly
### What changes were proposed in this pull request?

This PR proposes to exclude Unidoc checking in Hive domain. We don't publish this as a part of Spark documentation (see also https://github.com/apache/spark/blob/master/docs/_plugins/copy_api_dirs.rb#L30) and most of them are copy of Hive thrift server so that we can officially use Hive 2.3 release.

It doesn't much make sense to check the documentation generation against another domain, and that we don't use in documentation publish.

### Why are the changes needed?

To avoid unnecessary computation.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

By Jenkins:

```
========================================================================
Building Spark
========================================================================
[info] Building Spark using SBT with these arguments:  -Phadoop-2.7 -Phive-2.3 -Phive -Pmesos -Pkubernetes -Phive-thriftserver -Phadoop-cloud -Pkinesis-asl -Pspark-ganglia-lgpl -Pyarn test:package streaming-kinesis-asl-assembly/assembly
...

========================================================================
Building Unidoc API Documentation
========================================================================
[info] Building Spark unidoc using SBT with these arguments:  -Phadoop-2.7 -Phive-2.3 -Phive -Pmesos -Pkubernetes -Phive-thriftserver -Phadoop-cloud -Pkinesis-asl -Pspark-ganglia-lgpl -Pyarn unidoc
...
[info] Main Java API documentation successful.
...
[info] Main Scala API documentation successful.
```

Closes #26800 from HyukjinKwon/do-not-merge.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-12-09 13:15:49 +09:00
shahid 91b83de417 [SPARK-30086][SQL][TESTS] Run HiveThriftServer2ListenerSuite on a dedicated JVM to fix flakiness
### What changes were proposed in this pull request?

This PR tries to fix flakiness in `HiveThriftServer2ListenerSuite` by using a dedicated JVM (after we switch to Hive 2.3 by default in PR builders). Likewise in 4a73bed318, there's no explicit evidence for this fix.

See https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/114653/testReport/org.apache.spark.sql.hive.thriftserver.ui/HiveThriftServer2ListenerSuite/_It_is_not_a_test_it_is_a_sbt_testing_SuiteSelector_/

```
sbt.ForkMain$ForkError: sbt.ForkMain$ForkError: java.lang.LinkageError: loader constraint violation: loader (instance of net/bytebuddy/dynamic/loading/MultipleParentClassLoader) previously initiated loading for a different type with name "org/apache/hive/service/ServiceStateChangeListener"
	at org.mockito.codegen.HiveThriftServer2$MockitoMock$1974707245.<clinit>(Unknown Source)
	at sun.reflect.GeneratedSerializationConstructorAccessor164.newInstance(Unknown Source)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
	at org.objenesis.instantiator.sun.SunReflectionFactoryInstantiator.newInstance(SunReflectionFactoryInstantiator.java:48)
	at org.objenesis.ObjenesisBase.newInstance(ObjenesisBase.java:73)
	at org.mockito.internal.creation.instance.ObjenesisInstantiator.newInstance(ObjenesisInstantiator.java:19)
	at org.mockito.internal.creation.bytebuddy.SubclassByteBuddyMockMaker.createMock(SubclassByteBuddyMockMaker.java:47)
	at org.mockito.internal.creation.bytebuddy.ByteBuddyMockMaker.createMock(ByteBuddyMockMaker.java:25)
	at org.mockito.internal.util.MockUtil.createMock(MockUtil.java:35)
	at org.mockito.internal.MockitoCore.mock(MockitoCore.java:62)
	at org.mockito.Mockito.mock(Mockito.java:1908)
	at org.mockito.Mockito.mock(Mockito.java:1880)
	at org.apache.spark.sql.hive.thriftserver.ui.HiveThriftServer2ListenerSuite.createAppStatusStore(HiveThriftServer2ListenerSuite.scala:156)
	at org.apache.spark.sql.hive.thriftserver.ui.HiveThriftServer2ListenerSuite.$anonfun$new$3(HiveThriftServer2ListenerSuite.scala:47)
	at org.scalatest.OutcomeOf.outcomeOf(OutcomeOf.scala:85)
	at org.scalatest.OutcomeOf.outcomeOf$(OutcomeOf.scala:83)
	at org.scalatest.OutcomeOf$.outcomeOf(OutcomeOf.scala:104)
	at org.scalatest.Transformer.apply(Transformer.scala:22)
	at org.scalatest.Transformer.apply(Transformer.scala:20)
```

### Why are the changes needed?

To make test cases more robust.

### Does this PR introduce any user-facing change?

No (dev only).

### How was this patch tested?

Jenkins build.

Closes #26720 from shahidki31/mock.

Authored-by: shahid <shahidki31@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-11-30 20:30:04 +09:00
HyukjinKwon 4a73bed318 [SPARK-29991][INFRA] Support Hive 1.2 and Hive 2.3 (default) in PR builder
### What changes were proposed in this pull request?

Currently, Apache Spark PR Builder using `hive-1.2` for `hadoop-2.7` and `hive-2.3` for `hadoop-3.2`. This PR aims to support

- `[test-hive1.2]`  in PR builder
- `[test-hive2.3]` in PR builder to be consistent and independent of the default profile
- After this PR, all PR builders will use Hive 2.3 by default (because Spark uses Hive 2.3 by default as of c98e5eb339)
- Use default profile in AppVeyor build.

Note that this was reverted due to unexpected test failure at `ThriftServerPageSuite`, which was investigated in https://github.com/apache/spark/pull/26706 . This PR fixed it by letting it use their own forked JVM. There is no explicit evidence for this fix and it was just my speculation, and thankfully it fixed at least.

### Why are the changes needed?
This new tag allows us more flexibility.

### Does this PR introduce any user-facing change?
No. (This is a dev-only change.)

### How was this patch tested?
Check the Jenkins triggers in this PR.

Default:

```
========================================================================
Building Spark
========================================================================
[info] Building Spark using SBT with these arguments:  -Phadoop-2.7 -Phive-2.3 -Phive-thriftserver -Pmesos -Pspark-ganglia-lgpl -Phadoop-cloud -Phive -Pkubernetes -Pkinesis-asl -Pyarn test:package streaming-kinesis-asl-assembly/assembly
```

`[test-hive1.2][test-hadoop3.2]`:

```
========================================================================
Building Spark
========================================================================
[info] Building Spark using SBT with these arguments:  -Phadoop-3.2 -Phive-1.2 -Phadoop-cloud -Pyarn -Pspark-ganglia-lgpl -Phive -Phive-thriftserver -Pmesos -Pkubernetes -Pkinesis-asl test:package streaming-kinesis-asl-assembly/assembly
```

`[test-maven][test-hive-2.3]`:

```
========================================================================
Building Spark
========================================================================
[info] Building Spark using Maven with these arguments:  -Phadoop-2.7 -Phive-2.3 -Pspark-ganglia-lgpl -Pyarn -Phive -Phadoop-cloud -Pkinesis-asl -Pmesos -Pkubernetes -Phive-thriftserver clean package -DskipTests
```

Closes #26710 from HyukjinKwon/SPARK-29991.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-11-30 12:48:15 +09:00
Dongjoon Hyun f77c10de38 [SPARK-29923][SQL][TESTS] Set io.netty.tryReflectionSetAccessible for Arrow on JDK9+
### What changes were proposed in this pull request?

This PR aims to add `io.netty.tryReflectionSetAccessible=true` to the testing configuration for JDK11 because this is an officially documented requirement of Apache Arrow.

Apache Arrow community documented this requirement at `0.15.0` ([ARROW-6206](https://github.com/apache/arrow/pull/5078)).
> #### For java 9 or later, should set "-Dio.netty.tryReflectionSetAccessible=true".
> This fixes `java.lang.UnsupportedOperationException: sun.misc.Unsafe or java.nio.DirectByteBuffer.(long, int) not available`. thrown by netty.

### Why are the changes needed?

After ARROW-3191, Arrow Java library requires the property `io.netty.tryReflectionSetAccessible` to be set to true for JDK >= 9. After https://github.com/apache/spark/pull/26133, JDK11 Jenkins job seem to fail.

- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-3.2-jdk-11/676/
- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-3.2-jdk-11/677/
- https://amplab.cs.berkeley.edu/jenkins/view/Spark%20QA%20Test%20(Dashboard)/job/spark-master-test-maven-hadoop-3.2-jdk-11/678/

```scala
Previous exception in task:
sun.misc.Unsafe or java.nio.DirectByteBuffer.<init>(long, int) not available&#010;
io.netty.util.internal.PlatformDependent.directBuffer(PlatformDependent.java:473)&#010;
io.netty.buffer.NettyArrowBuf.getDirectBuffer(NettyArrowBuf.java:243)&#010;
io.netty.buffer.NettyArrowBuf.nioBuffer(NettyArrowBuf.java:233)&#010;
io.netty.buffer.ArrowBuf.nioBuffer(ArrowBuf.java:245)&#010;
org.apache.arrow.vector.ipc.message.ArrowRecordBatch.computeBodyLength(ArrowRecordBatch.java:222)&#010;
```

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

Pass the Jenkins with JDK11.

Closes #26552 from dongjoon-hyun/SPARK-ARROW-JDK11.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-11-15 23:58:15 -08:00
Jungtaek Lim (HeartSaVioR) 121510cb7b [SPARK-29604][SQL][FOLLOWUP][test-hadoop3.2] Let SparkSQLEnvSuite to be run in dedicated JVM
### What changes were proposed in this pull request?

This patch addresses CI build issue on sbt Hadoop-3.2 Jenkins job: SparkSQLEnvSuite are failing. Looks like the reason of test failure is the test checks registered listeners from active SparkSession which could be interfered with other test suites running concurrently. If we isolate test suite the problem should be gone.

### Why are the changes needed?

CI builds for "spark-master-test-sbt-hadoop-3.2" are failing.

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

I've run the single test suite with below command and it passed 3 times sequentially:

```
build/sbt "hive-thriftserver/testOnly *.SparkSQLEnvSuite" -Phadoop-3.2 -Phive-thriftserver
```

so we expect the test suite will pass if we isolate the test suite.

Closes #26342 from HeartSaVioR/SPARK-29604-FOLLOWUP.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan.opensource@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-10-31 08:34:39 -07:00
Dongjoon Hyun df28671800 [SPARK-29282][TESTS] Use the same VM configurations for test/benchmark
### What changes were proposed in this pull request?

This PR aims to specify the JDK8 default configurations `-XX:+UseParallelGC -XX:-UseDynamicNumberOfGCThreads` explicitly. As we see in this PR [here](https://github.com/apache/spark/pull/25966/files#diff-12b89b7ee67c63c2254b749c8f8d0694R10), this will make the comparison between JDK8 and JDK11 easier by removing a misleading regression.

**NOTE THAT THESE JVM CONFS ARE ONLY FOR BENCHMARK COMPARISON, NOT FOR A PRODUCTION**

### Why are the changes needed?

There exists many JVM-level changes between JDK8 and JDK11. For example, the followings are notable changes and it turns out that especially (1) and (2) shows a misleading regression in our micro-benchmark environment because our microbenchmark uses small VM memory.
1. [JEP 248: Make G1 the Default Garbage Collector](https://bugs.openjdk.java.net/browse/JDK-8073273) **JDK9+**
2. [Enable UseDynamicNumberOfGCThreads by default](https://bugs.openjdk.java.net/browse/JDK-8198547) **JDK11+**
3. [Change default value of HeapSizePerGCThread](https://bugs.openjdk.java.net/browse/JDK-8200417) **JDK11+**

### Does this PR introduce any user-facing change?

No.

### How was this patch tested?

This is a test-only JVM configuration change. Manually, run the benchmark.

Closes #25966 from dongjoon-hyun/SPARK-29282.

Authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-09-29 15:11:46 -07:00
Yuming Wang 8c3f27ceb4 [SPARK-28683][BUILD] Upgrade Scala to 2.12.10
## What changes were proposed in this pull request?

This PR upgrade Scala to **2.12.10**.

Release notes:
- Fix regression in large string interpolations with non-String typed splices
- Revert "Generate shallower ASTs in pattern translation"
- Fix regression in classpath when JARs have 'a.b' entries beside 'a/b'

- Faster compiler: 5–10% faster since 2.12.8
- Improved compatibility with JDK 11, 12, and 13
- Experimental support for build pipelining and outline type checking

More details:
https://github.com/scala/scala/releases/tag/v2.12.10
https://github.com/scala/scala/releases/tag/v2.12.9

## How was this patch tested?

Existing tests

Closes #25404 from wangyum/SPARK-28683.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-09-18 13:30:36 -07:00
Yuming Wang 6e12b585a9 [SPARK-28527][SQL][TEST] Re-run all the tests in SQLQueryTestSuite via Thrift Server
### What changes were proposed in this pull request?
This PR build a test framework that directly re-run all the tests in `SQLQueryTestSuite` via Thrift Server. But it's a little different from `SQLQueryTestSuite`:
1. Can not support [UDF testing](44e607e921/sql/core/src/test/scala/org/apache/spark/sql/SQLQueryTestSuite.scala (L293-L297)).
2. Can not support `DESC` command and `SHOW` command because `SQLQueryTestSuite` [formatted the output](1882912cca/sql/core/src/main/scala/org/apache/spark/sql/execution/HiveResult.scala (L38-L50).).

When building this framework, found two bug:
[SPARK-28624](https://issues.apache.org/jira/browse/SPARK-28624): `make_date` is inconsistent when reading from table
[SPARK-28611](https://issues.apache.org/jira/browse/SPARK-28611): Histogram's height is different

found two features that ThriftServer can not support:
[SPARK-28636](https://issues.apache.org/jira/browse/SPARK-28636): ThriftServer can not support decimal type with negative scale
[SPARK-28637](https://issues.apache.org/jira/browse/SPARK-28637): ThriftServer can not support interval type

Also, found two inconsistent behavior:
[SPARK-28620](https://issues.apache.org/jira/browse/SPARK-28620): Double type returned for float type in Beeline/JDBC
[SPARK-28619](https://issues.apache.org/jira/browse/SPARK-28619):  The golden result file is different when tested by `bin/spark-sql`

### Why are the changes needed?

Improve the overall test coverage for Thrift Server.

### Does this PR introduce any user-facing change?
No

### How was this patch tested?
N/A

Closes #25567 from wangyum/SPARK-28527.

Lead-authored-by: Yuming Wang <yumwang@ebay.com>
Co-authored-by: Hyukjin Kwon <gurwls223@gmail.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-08-26 22:39:57 +09:00
Dongjoon Hyun f0834d3a7f Revert "[SPARK-28527][SQL][TEST] Re-run all the tests in SQLQueryTestSuite via Thrift Server"
This reverts commit efbb035902.
2019-08-18 16:54:24 -07:00
Yuming Wang efbb035902 [SPARK-28527][SQL][TEST] Re-run all the tests in SQLQueryTestSuite via Thrift Server
## What changes were proposed in this pull request?

This PR build a test framework that directly re-run all the tests in `SQLQueryTestSuite` via Thrift Server. But it's a little different from `SQLQueryTestSuite`:
1. Can not support [UDF testing](44e607e921/sql/core/src/test/scala/org/apache/spark/sql/SQLQueryTestSuite.scala (L293-L297)).
2. Can not support `DESC` command and `SHOW` command because `SQLQueryTestSuite` [formatted the output](1882912cca/sql/core/src/main/scala/org/apache/spark/sql/execution/HiveResult.scala (L38-L50).).

When building this framework, found two bug:
[SPARK-28624](https://issues.apache.org/jira/browse/SPARK-28624): `make_date` is inconsistent when reading from table
[SPARK-28611](https://issues.apache.org/jira/browse/SPARK-28611): Histogram's height is different

found two features that ThriftServer can not support:
[SPARK-28636](https://issues.apache.org/jira/browse/SPARK-28636): ThriftServer can not support decimal type with negative scale
[SPARK-28637](https://issues.apache.org/jira/browse/SPARK-28637): ThriftServer can not support interval type

Also, found two inconsistent behavior:
[SPARK-28620](https://issues.apache.org/jira/browse/SPARK-28620): Double type returned for float type in Beeline/JDBC
[SPARK-28619](https://issues.apache.org/jira/browse/SPARK-28619):  The golden result file is different when tested by `bin/spark-sql`

## How was this patch tested?

N/A

Closes #25373 from wangyum/SPARK-28527.

Authored-by: Yuming Wang <yumwang@ebay.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-08-17 19:12:50 -07:00
Jungtaek Lim (HeartSaVioR) 128ea37bda [SPARK-28601][CORE][SQL] Use StandardCharsets.UTF_8 instead of "UTF-8" string representation, and get rid of UnsupportedEncodingException
## What changes were proposed in this pull request?

This patch tries to keep consistency whenever UTF-8 charset is needed, as using `StandardCharsets.UTF_8` instead of using "UTF-8". If the String type is needed, `StandardCharsets.UTF_8.name()` is used.

This change also brings the benefit of getting rid of `UnsupportedEncodingException`, as we're providing `Charset` instead of `String` whenever possible.

This also changes some private Catalyst helper methods to operate on encodings as `Charset` objects rather than strings.

## How was this patch tested?

Existing unit tests.

Closes #25335 from HeartSaVioR/SPARK-28601.

Authored-by: Jungtaek Lim (HeartSaVioR) <kabhwan@gmail.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-08-05 20:45:54 -07:00
HyukjinKwon 8e1602a04f [SPARK-28568][SHUFFLE][DOCS] Make Javadoc in org.apache.spark.shuffle.api visible
## What changes were proposed in this pull request?

This PR proposes to make Javadoc in org.apache.spark.shuffle.api visible.

## How was this patch tested?

Manually built the doc and checked:

![Screen Shot 2019-08-01 at 4 48 23 PM](https://user-images.githubusercontent.com/6477701/62275587-400cc080-b47d-11e9-8fba-c4a0607093d1.png)

Closes #25323 from HyukjinKwon/SPARK-28568.

Authored-by: HyukjinKwon <gurwls223@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-08-01 10:24:29 -07:00
Martin Junghanns 709387d660 [SPARK-27300][GRAPH] Add Spark Graph modules and dependencies
## What changes were proposed in this pull request?

This PR introduces the necessary Maven modules for the new [Spark Graph](https://issues.apache.org/jira/browse/SPARK-25994) feature for Spark 3.0.

* `spark-graph` is a parent module that users depend on to get all graph functionalities (Cypher and Graph Algorithms)
* `spark-graph-api` defines the [Property Graph API](https://docs.google.com/document/d/1Wxzghj0PvpOVu7XD1iA8uonRYhexwn18utdcTxtkxlI) that is being shared between Cypher and Algorithms
* `spark-cypher` contains a Cypher query engine implementation

Both, `spark-graph-api` and `spark-cypher` depend on Spark SQL.

Note, that the Maven module for Graph Algorithms is not part of this PR and will be introduced in https://issues.apache.org/jira/browse/SPARK-27302

A PoC for a running Cypher implementation can be found in this WIP PR https://github.com/apache/spark/pull/24297

## How was this patch tested?

Pass the Jenkins with all profiles and manually build and check the followings.
```
$ ls assembly/target/scala-2.12/jars/spark-cypher*
assembly/target/scala-2.12/jars/spark-cypher_2.12-3.0.0-SNAPSHOT.jar

$ ls assembly/target/scala-2.12/jars/spark-graph* | grep -v graphx
assembly/target/scala-2.12/jars/spark-graph-api_2.12-3.0.0-SNAPSHOT.jar
assembly/target/scala-2.12/jars/spark-graph_2.12-3.0.0-SNAPSHOT.jar
```

Closes #24490 from s1ck/SPARK-27300.

Lead-authored-by: Martin Junghanns <martin.junghanns@neotechnology.com>
Co-authored-by: Max Kießling <max@kopfueber.org>
Co-authored-by: Martin Junghanns <martin.junghanns@neo4j.com>
Co-authored-by: Dongjoon Hyun <dhyun@apple.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-06-09 00:26:26 -07:00
Ryan Blue d1371a2dad [SPARK-27964][SQL] Move v2 catalog update methods to CatalogV2Util
## What changes were proposed in this pull request?

Move methods that implement v2 catalog operations to CatalogV2Util so they can be used in #24768.

## How was this patch tested?

Behavior is validated by existing tests.

Closes #24813 from rdblue/SPARK-27964-add-catalog-v2-util.

Authored-by: Ryan Blue <blue@apache.org>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-06-05 19:44:53 -07:00
Sean Owen 596a5ff273 [MINOR][BUILD] Update genjavadoc to 0.13
## What changes were proposed in this pull request?

Kind of related to https://github.com/gatorsmile/spark/pull/5 - let's update genjavadoc to see if it generates fewer spurious javadoc errors to begin with.

## How was this patch tested?

Existing docs build

Closes #24443 from srowen/genjavadoc013.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: HyukjinKwon <gurwls223@apache.org>
2019-04-24 13:44:48 +09:00
Gengliang Wang 3748b381df [SPARK-27460][TESTS][FOLLOWUP] Add HiveClientVersions to parallel test suite list
## What changes were proposed in this pull request?

The test time of `HiveClientVersions` is around 3.5 minutes.
This PR is to add it into the parallel test suite list. To make sure there is no colliding warehouse location,  we can change the warehouse path to a temporary directory.

## How was this patch tested?

Unit test

Closes #24404 from gengliangwang/parallelTestFollowUp.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-04-18 15:37:55 -07:00
Gengliang Wang 9c238b8a46 [SPARK-27460][TESTS] Running slowest test suites in their own forked JVMs for higher parallelism
## What changes were proposed in this pull request?

This patch modifies SparkBuild so that the largest / slowest test suites (or collections of suites) can run in their own forked JVMs, allowing them to be run in parallel with each other. This opt-in / whitelisting approach allows us to increase parallelism without having to fix a long-tail of flakiness / brittleness issues in tests which aren't performance bottlenecks.

See comments in SparkBuild.scala for information on the details, including a summary of why we sometimes opt to run entire groups of tests in a single forked JVM .

The time of full new pull request test in Jenkins is reduced by around 53%:
before changes: 4hr 40min
after changes: 2hr 13min

## How was this patch tested?

Unit test

Closes #24373 from gengliangwang/parallelTest.

Authored-by: Gengliang Wang <gengliang.wang@databricks.com>
Signed-off-by: Wenchen Fan <wenchen@databricks.com>
2019-04-18 20:49:36 +08:00
gatorsmile 61feb16352 [SPARK-27479][BUILD] Hide API docs for org.apache.spark.util.kvstore
## What changes were proposed in this pull request?

The API docs should not include the "org.apache.spark.util.kvstore" package because they are internal private APIs. See the doc link: https://spark.apache.org/docs/latest/api/java/org/apache/spark/util/kvstore/LevelDB.html

## How was this patch tested?
N/A

Closes #24386 from gatorsmile/rmDoc.

Authored-by: gatorsmile <gatorsmile@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-04-16 19:53:01 -07:00
Sean Owen 8bc304f97e [SPARK-26132][BUILD][CORE] Remove support for Scala 2.11 in Spark 3.0.0
## What changes were proposed in this pull request?

Remove Scala 2.11 support in build files and docs, and in various parts of code that accommodated 2.11. See some targeted comments below.

## How was this patch tested?

Existing tests.

Closes #23098 from srowen/SPARK-26132.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-03-25 10:46:42 -05:00
Dilip Biswal b15423361b [SPARK-27016][SQL][BUILD][FOLLOW-UP] Treat all antlr warnings as errors while generating the parser.
## What changes were proposed in this pull request?
Use the sbt maven plugin option`antlr4TreatWarningsAsErrors` to make sure the warnings are treated as errors while generating the parser. In the absence of it, we may inadvertently introduce problems while making grammar changes. Please refer to PR-23897 to know more about the context. We made a change in [pr-23925](https://github.com/apache/spark/pull/23925) which handled only the maven build.

In this PR, we handle the sbt build. I had submitted [PR-23](https://github.com/ihji/sbt-antlr4/pull/23) to enhance the sbt-antlr plugin to make is possible to pass the error on warning option.

## How was this patch tested?
Force an warning in the grammar file to check if the build fails. Then remove the warning to verify the build succeeds.

Closes #24060 from dilipbiswal/sbt_build_antlr.

Authored-by: Dilip Biswal <dbiswal@us.ibm.com>
Signed-off-by: Dongjoon Hyun <dhyun@apple.com>
2019-03-11 21:27:51 -07:00
seancxmao 755f9c2076 [SPARK-26813][BUILD] Consolidate java version across language compilers and build tools
## What changes were proposed in this pull request?
The java version here means versions of javac source, javac target, scalac target. They could be consolidated as a single version (currently 1.8)

|      |javac|scalac   |
|------|-----|---------|
|source|1.8  |2.12/2.11|
|target|1.8  |1.8      |

The current issues are as follows

* Maven build defines a single property (`java.version`) to specify java version while SBT build defines different properties for javac (`javacJVMVersion`) and scalac (`scalacJVMVersion`). SBT build should use a single property as Maven build does.
* Furthermore, it's better for SBT build to refer to `java.version` defined by Maven build. This is possible since we've already been using sbt-pom-reader.

## How was this patch tested?
Tested locally.

```
build/mvn clean compile
build/sbt clean compile
```

Closes #23724 from seancxmao/specify-java-version-once.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-02-04 08:56:24 -06:00
seancxmao 2514163366 [SPARK-26799][BUILD] Make ANTLR v4 version consistent between Maven and SBT
## What changes were proposed in this pull request?
Currently ANTLR v4 versions used by Maven and SBT are slightly different. Maven uses `4.7.1` while SBT uses `4.7`.

* Maven(`pom.xml`): `<antlr4.version>4.7.1</antlr4.version>`
* SBT(`project/SparkBuild.scala`): `antlr4Version in Antlr4 := "4.7"`

We should make Maven and SBT use a single version. Furthermore we'd better specify antlr4 version in one place to avoid mismatch between Maven and SBT in the future.

This PR lets SBT use antlr4 version specified in Maven POM file, rather than specify its own antlr4 version. This is in the same as how `hadoop.version` is specified in `project/SparkBuild.scala`

## How was this patch tested?
Test locally.

After run `sbt compile`, Java files generated by ANTLR are located at:

```
sql/catalyst/target/scala-2.12/src_managed/main/antlr4/org/apache/spark/sql/catalyst/parser/*.java
```

These Java files have a comment at the head. We can see now SBT uses ANTLR `4.7.1`.

```
// Generated from .../spark/sql/catalyst/src/main/antlr4/org/apache/spark/sql/catalyst/parser/SqlBase.g4 by ANTLR 4.7.1
```

Closes #23713 from seancxmao/antlr4-version-consistent.

Authored-by: seancxmao <seancxmao@gmail.com>
Signed-off-by: gatorsmile <gatorsmile@gmail.com>
2019-01-31 14:39:32 -08:00
Gabor Somogyi 773efede20 [SPARK-26254][CORE] Extract Hive + Kafka dependencies from Core.
## What changes were proposed in this pull request?

There are ugly provided dependencies inside core for the following:
* Hive
* Kafka

In this PR I've extracted them out. This PR contains the following:
* Token providers are now loaded with service loader
* Hive token provider moved to hive project
* Kafka token provider extracted into a new project

## How was this patch tested?

Existing + newly added unit tests.
Additionally tested on cluster.

Closes #23499 from gaborgsomogyi/SPARK-26254.

Authored-by: Gabor Somogyi <gabor.g.somogyi@gmail.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2019-01-25 10:36:00 -08:00
Sean Owen 36440e6447 [SPARK-26306][TEST][BUILD] More memory to de-flake SorterSuite
## What changes were proposed in this pull request?

Increase test memory to avoid OOM in TimSort-related tests.

## How was this patch tested?

Existing tests.

Closes #23425 from srowen/SPARK-26306.

Authored-by: Sean Owen <sean.owen@databricks.com>
Signed-off-by: Sean Owen <sean.owen@databricks.com>
2019-01-04 15:35:23 -06:00
Marcelo Vanzin 187bb7d008 [SPARK-25957][FOLLOWUP] Build python docker image in sbt build too.
docker-image-tool.sh requires explicit argument to create the python
image now; do that from the sbt integration tests target too.

Closes #23172 from vanzin/SPARK-25957.followup.

Authored-by: Marcelo Vanzin <vanzin@cloudera.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2018-12-03 13:54:09 -08:00
Marcelo Vanzin 2d89d109e1 [SPARK-26025][K8S] Speed up docker image build on dev repo.
The "build context" for a docker image - basically the whole contents of the
current directory where "docker" is invoked - can be huge in a dev build,
easily breaking a couple of gigs.

Doing that copy 3 times during the build of docker images severely slows
down the process.

This patch creates a smaller build context - basically mimicking what the
make-distribution.sh script does, so that when building the docker images,
only the necessary bits are in the current directory. For PySpark and R that
is optimized further, since those images are built based on the previously
built Spark main image.

In my current local clone, the dir size is about 2G, but with this script
the "context" sent to docker is about 250M for the main image, 1M for the
pyspark image and 8M for the R image. That speeds up the image builds
considerably.

I also snuck in a fix to the k8s integration test dependencies in the sbt
build, so that the examples are properly built (without having to do it
manually).

Closes #23019 from vanzin/SPARK-26025.

Authored-by: Marcelo Vanzin <vanzin@cloudera.com>
Signed-off-by: Marcelo Vanzin <vanzin@cloudera.com>
2018-11-27 09:09:16 -08:00
DB Tsai ad853c5678
[SPARK-25956] Make Scala 2.12 as default Scala version in Spark 3.0
## What changes were proposed in this pull request?

This PR makes Spark's default Scala version as 2.12, and Scala 2.11 will be the alternative version. This implies that Scala 2.12 will be used by our CI builds including pull request builds.

We'll update the Jenkins to include a new compile-only jobs for Scala 2.11 to ensure the code can be still compiled with Scala 2.11.

## How was this patch tested?

existing tests

Closes #22967 from dbtsai/scala2.12.

Authored-by: DB Tsai <d_tsai@apple.com>
Signed-off-by: Dongjoon Hyun <dongjoon@apache.org>
2018-11-14 16:22:23 -08:00